Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 HSPD1P1-201ENST00000503199 1726 ntBASIC7.27□□□□□ -1.25
ERCC4Q92889 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
ERCC4Q92889 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
ERCC4Q92889 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
ERCC4Q92889 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
ERCC4Q92889 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 PPIAP24-201ENST00000328558 471 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC4Q92889 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AC245884.2-201ENST00000426257 404 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AC114973.1-201ENST00000429057 632 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 PUDPP2-201ENST00000431423 643 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC4Q92889 H3F3BP1-201ENST00000440551 403 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AL356133.1-201ENST00000444762 372 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 SUMO2P1-206ENST00000445436 284 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AC092967.1-201ENST00000449016 481 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 MGAT2P1-201ENST00000449718 797 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 RPEP1-201ENST00000504507 658 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AC096571.1-202ENST00000506634 735 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 RN7SKP67-201ENST00000515905 235 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AC130366.1-201ENST00000526505 1192 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC7.26□□□□□ -1.25
ERCC4Q92889 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC4Q92889 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AL450270.1-201ENST00000606160 391 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
ERCC4Q92889 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.26□□□□□ -1.25
ERCC4Q92889 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 SAGE3P-201ENST00000619800 1635 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.26□□□□□ -1.25
ERCC4Q92889 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
ERCC4Q92889 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
ERCC4Q92889 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC140479.2-201ENST00000421567 3130 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC011369.2-201ENST00000624423 1567 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC010132.4-201ENST00000569883 1368 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
ERCC4Q92889 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 RNA5SP251-201ENST00000410614 137 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 TMA16P2-201ENST00000413187 601 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 MRPL50P1-201ENST00000431951 384 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 CHCHD4P5-201ENST00000436684 427 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 MTCYBP11-201ENST00000447254 1109 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 RPS3AP49-201ENST00000472161 790 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 RN7SL70P-201ENST00000478322 302 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 MTCO2P9-201ENST00000503214 694 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms