Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC106754.1-201ENST00000562632 1513 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RN7SKP161-201ENST00000411110 305 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RPS3AP25-201ENST00000411660 793 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL445213.1-201ENST00000412589 747 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 GRPEL2P2-201ENST00000421856 670 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 REREP1Y-201ENST00000422655 198 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 USP12PY-201ENST00000427677 1064 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RAB9AP5-201ENST00000437794 597 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 REREP2Y-201ENST00000439103 200 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RAB9AP2-201ENST00000443911 597 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RPL6P24-201ENST00000445338 864 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 PFN1P11-201ENST00000445829 389 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RPS4XP19-201ENST00000460237 736 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RN7SL390P-201ENST00000470634 284 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 MTCO3P27-201ENST00000514397 196 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC091304.4-201ENST00000565703 620 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC004477.3-201ENST00000614061 590 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC005277.2-201ENST00000617898 390 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AL645927.2-201ENST00000618350 349 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 U1.34-201ENST00000618578 162 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC006328.2-201ENST00000623198 397 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC005753.1-201ENST00000623837 618 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AP003476.1-201ENST00000623984 516 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC073342.3-201ENST00000624211 193 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC012005.2-201ENST00000624333 397 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AP003486.1-201ENST00000525716 3994 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 NAMPTP1-201ENST00000440465 2514 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AC011503.2-201ENST00000594230 1500 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 RNU1-56P-201ENST00000391303 164 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 OR51A6P-201ENST00000418680 1004 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 MTND4LP13-201ENST00000425022 298 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AL596268.1-201ENST00000427910 1048 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 RPS26P4-201ENST00000431743 355 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AC004854.1-201ENST00000440356 349 ntBASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.95□□□□□ -1.46
PTCHD4Q6ZW05 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms