Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
VPS72Q15906 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VPS72Q15906 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
VPS72Q15906 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS72Q15906 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
VPS72Q15906 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VPS72Q15906 AC025809.2-201ENST00000625085 1802 ntBASIC8.03□□□□□ -1.12
VPS72Q15906 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VPS72Q15906 AL161756.3-201ENST00000641216 2071 ntBASIC8.02□□□□□ -1.12
VPS72Q15906 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
VPS72Q15906 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
VPS72Q15906 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.02□□□□□ -1.12
VPS72Q15906 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
VPS72Q15906 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
VPS72Q15906 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC8.02□□□□□ -1.12
VPS72Q15906 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
VPS72Q15906 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
VPS72Q15906 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 MIR541-201ENST00000401360 84 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 RN7SKP273-201ENST00000411392 314 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS72Q15906 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 AC009784.1-201ENST00000426484 460 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 RSL24D1P2-201ENST00000445584 366 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 RPL35AP28-201ENST00000459730 331 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 RPL35AP19-201ENST00000469425 329 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 RPS17P15-201ENST00000475609 349 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS72Q15906 AC008676.3-201ENST00000521237 435 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.02□□□□□ -1.13
VPS72Q15906 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
VPS72Q15906 AC004825.1-201ENST00000555068 586 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC8.02□□□□□ -1.13
VPS72Q15906 RN7SL708P-201ENST00000580952 299 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 AC100814.1-201ENST00000606963 623 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 SNORA35B-201ENST00000607417 129 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 AL162574.2-201ENST00000614618 657 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 OR7A1P-202ENST00000641542 1158 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
VPS72Q15906 Z99129.4-201ENST00000624649 2435 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 ZNF840P-201ENST00000504759 1996 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 MTCO1P8-201ENST00000416914 1523 ntBASIC8.02□□□□□ -1.13
VPS72Q15906 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
VPS72Q15906 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VPS72Q15906 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
VPS72Q15906 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VPS72Q15906 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
VPS72Q15906 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
VPS72Q15906 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
VPS72Q15906 RNA5SP375-201ENST00000362975 119 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 RNU105B-201ENST00000364478 208 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 RPL36P18-201ENST00000419316 318 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 RPS15AP30-201ENST00000420976 390 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
VPS72Q15906 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.01□□□□□ -1.13
VPS72Q15906 UBE2V2P3-201ENST00000433562 437 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS72Q15906 RN7SL172P-201ENST00000460535 303 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS72Q15906 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
VPS72Q15906 AC105420.1-201ENST00000504389 582 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 RNU6-615P-201ENST00000516065 106 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS72Q15906 IGLV3-6-201ENST00000523937 250 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC025857.1-201ENST00000525252 377 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS72Q15906 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC8.01□□□□□ -1.13
VPS72Q15906 DPPA2P4-201ENST00000563717 878 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC8.01□□□□□ -1.13
VPS72Q15906 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.01□□□□□ -1.13
VPS72Q15906 AC104785.1-201ENST00000603220 588 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC018690.1-201ENST00000608144 626 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 AC008115.3-201ENST00000614874 549 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 MIR6837-201ENST00000620884 64 ntBASIC8.01□□□□□ -1.13
VPS72Q15906 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms