Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AL121579.2-201ENST00000555466 590 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AC091304.5-201ENST00000568969 158 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.59□□□□□ -1.51
SCN1BQ07699 PTCHD3P1-201ENST00000612350 537 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.59□□□□□ -1.51
SCN1BQ07699 AC027559.1-201ENST00000636288 271 ntBASIC5.59□□□□□ -1.51
SCN1BQ07699 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN1BQ07699 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.59□□□□□ -1.52
SCN1BQ07699 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SCN1BQ07699 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SCN1BQ07699 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCN1BQ07699 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SCN1BQ07699 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SCN1BQ07699 AL121768.1-201ENST00000613917 2544 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN1BQ07699 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN1BQ07699 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 RN7SKP130-201ENST00000364924 301 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 RNA5SP152-201ENST00000365184 110 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN1BQ07699 UBBP1-201ENST00000392399 473 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.58□□□□□ -1.52
SCN1BQ07699 EEF1GP6-201ENST00000402309 905 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 RPLP1P10-201ENST00000413972 339 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 DPPA2P2-201ENST00000418220 897 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 RPS10P21-201ENST00000430654 475 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 CHCHD4P5-201ENST00000436684 427 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.58□□□□□ -1.52
SCN1BQ07699 CCRL1P1-201ENST00000449542 1053 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 RBMY2EP-202ENST00000456360 940 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC107015.1-201ENST00000466902 747 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 RPL23AP64-201ENST00000469465 435 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC021146.11-201ENST00000503319 491 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 RNA5SP318-201ENST00000516352 92 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC104997.1-201ENST00000519761 717 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AL445383.1-201ENST00000554689 874 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC010287.1-201ENST00000566916 357 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 ANP32BP1-202ENST00000568553 737 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 LSM1P2-201ENST00000604911 322 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC005277.2-201ENST00000617898 390 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 MRPL57P1-201ENST00000621486 265 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 AC105105.5-201ENST00000622635 1294 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.58□□□□□ -1.52
SCN1BQ07699 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SCN1BQ07699 GTF2IP4-201ENST00000453092 2054 ntBASIC5.58□□□□□ -1.52
SCN1BQ07699 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN1BQ07699 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SCN1BQ07699 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SCN1BQ07699 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SCN1BQ07699 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SCN1BQ07699 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC125238.2-201ENST00000430003 1440 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 AC109446.4-201ENST00000623235 2755 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AC107021.2-201ENST00000567714 2095 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.57□□□□□ -1.52
SCN1BQ07699 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.57□□□□□ -1.52
SCN1BQ07699 AL022311.1-201ENST00000623726 19416 ntBASIC5.57□□□□□ -1.52
SCN1BQ07699 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SCN1BQ07699 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SCN1BQ07699 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms