Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR4701-201ENST00000583094 63 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH6P55285 AC119403.2-201ENST00000590960 598 ntBASIC6.28□□□□□ -1.4
CDH6P55285 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH6P55285 AC073389.3-201ENST00000609434 935 ntBASIC6.28□□□□□ -1.4
CDH6P55285 uc_338.26-201ENST00000612659 160 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC073488.6-201ENST00000632293 754 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AL357140.4-201ENST00000636827 412 ntBASIC6.28□□□□□ -1.4
CDH6P55285 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.27□□□□□ -1.4
CDH6P55285 AP003486.1-201ENST00000525716 3994 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 RNU1-134P-201ENST00000362935 165 ntBASIC6.27□□□□□ -1.41
CDH6P55285 GNG5P2-201ENST00000372054 207 ntBASIC6.27□□□□□ -1.41
CDH6P55285 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 RBBP4P5-201ENST00000398583 1266 ntBASIC6.27□□□□□ -1.41
CDH6P55285 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 RPL12P12-201ENST00000424633 501 ntBASIC6.27□□□□□ -1.41
CDH6P55285 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 CUBNP2-201ENST00000443534 1139 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC016027.4-201ENST00000450866 277 ntBASIC6.27□□□□□ -1.41
CDH6P55285 HMGB1P7-201ENST00000450921 612 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC005165.2-201ENST00000466070 380 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AL117692.1-201ENST00000494283 713 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH6P55285 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 DPPA3P2-202ENST00000557188 1219 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC002519.2-203ENST00000567043 837 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 AL645933.2-201ENST00000606743 1207 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AL359091.2-201ENST00000609303 556 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH6P55285 MIR6889-201ENST00000613185 59 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AC096861.1-201ENST00000616652 240 ntBASIC6.27□□□□□ -1.41
CDH6P55285 AL512652.1-201ENST00000619006 500 ntBASIC6.27□□□□□ -1.41
CDH6P55285 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH6P55285 AC111152.1-202ENST00000635848 339 ntBASIC6.27□□□□□ -1.41
CDH6P55285 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH6P55285 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 AP000547.3-204ENST00000588548 2523 ntBASIC6.27□□□□□ -1.41
CDH6P55285 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH6P55285 XKRY2-202ENST00000623874 1581 ntBASIC6.27□□□□□ -1.41
CDH6P55285 XKRY-202ENST00000624960 1581 ntBASIC6.27□□□□□ -1.41
CDH6P55285 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH6P55285 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 AC090181.3-201ENST00000624777 1514 ntBASIC6.26□□□□□ -1.41
CDH6P55285 AC020656.2-201ENST00000613291 5309 ntBASIC6.26□□□□□ -1.41
CDH6P55285 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 SNORD1C-201ENST00000363315 78 ntBASIC6.26□□□□□ -1.41
CDH6P55285 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH6P55285 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 RPSAP65-201ENST00000429660 595 ntBASIC6.26□□□□□ -1.41
CDH6P55285 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 AC091874.2-201ENST00000505889 720 ntBASIC6.26□□□□□ -1.41
CDH6P55285 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH6P55285 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH6P55285 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 AC244502.2-201ENST00000543361 851 ntBASIC6.26□□□□□ -1.41
CDH6P55285 AL049779.3-201ENST00000557141 606 ntBASIC6.26□□□□□ -1.41
CDH6P55285 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms