Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.86□□□□□ -1.47
CENPAP49450 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.86□□□□□ -1.47
CENPAP49450 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CENPAP49450 AL157899.1-201ENST00000604110 936 ntBASIC5.86□□□□□ -1.47
CENPAP49450 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.86□□□□□ -1.47
CENPAP49450 AL445649.1-201ENST00000615941 691 ntBASIC5.86□□□□□ -1.47
CENPAP49450 AL122125.1-201ENST00000616999 600 ntBASIC5.86□□□□□ -1.47
CENPAP49450 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.86□□□□□ -1.47
CENPAP49450 AP001264.1-201ENST00000620602 703 ntBASIC5.86□□□□□ -1.47
CENPAP49450 AC127071.2-201ENST00000623293 527 ntBASIC5.86□□□□□ -1.47
CENPAP49450 LINC00216-201ENST00000623548 1126 ntBASIC5.86□□□□□ -1.47
CENPAP49450 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.86□□□□□ -1.47
CENPAP49450 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CENPAP49450 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
CENPAP49450 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CENPAP49450 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CENPAP49450 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CENPAP49450 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CENPAP49450 CUL4AP1-201ENST00000514750 1863 ntBASIC5.85□□□□□ -1.47
CENPAP49450 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AC092701.1-201ENST00000623627 1551 ntBASIC5.85□□□□□ -1.47
CENPAP49450 WDR95P-201ENST00000425638 1542 ntBASIC5.85□□□□□ -1.47
CENPAP49450 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.85□□□□□ -1.47
CENPAP49450 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.85□□□□□ -1.47
CENPAP49450 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 OR11H13P-201ENST00000359695 979 ntBASIC5.85□□□□□ -1.47
CENPAP49450 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CENPAP49450 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CENPAP49450 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.85□□□□□ -1.47
CENPAP49450 AL161742.1-201ENST00000418154 584 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC097721.1-201ENST00000427150 1253 ntBASIC5.85□□□□□ -1.47
CENPAP49450 ETF1P1-206ENST00000427296 984 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.85□□□□□ -1.47
CENPAP49450 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 RPS10P28-201ENST00000480396 498 ntBASIC5.85□□□□□ -1.47
CENPAP49450 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.85□□□□□ -1.47
CENPAP49450 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.85□□□□□ -1.47
CENPAP49450 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 RBMS2P1-201ENST00000525031 1226 ntBASIC5.85□□□□□ -1.47
CENPAP49450 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.85□□□□□ -1.47
CENPAP49450 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.85□□□□□ -1.47
CENPAP49450 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.85□□□□□ -1.47
CENPAP49450 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.85□□□□□ -1.47
CENPAP49450 AC091304.5-201ENST00000568969 158 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC122134.1-202ENST00000569111 1201 ntBASIC5.85□□□□□ -1.47
CENPAP49450 TXNP4-201ENST00000575018 310 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC090241.1-201ENST00000587732 621 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AC091133.5-201ENST00000603088 301 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC093635.1-201ENST00000609028 555 ntBASIC5.85□□□□□ -1.47
CENPAP49450 AC253576.2-201ENST00000618815 580 ntBASIC5.85□□□□□ -1.47
CENPAP49450 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 AC074140.1-201ENST00000621617 208 ntBASIC5.85□□□□□ -1.47
CENPAP49450 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.85□□□□□ -1.47
CENPAP49450 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.85□□□□□ -1.47
CENPAP49450 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CENPAP49450 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CENPAP49450 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CENPAP49450 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.84□□□□□ -1.47
CENPAP49450 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CENPAP49450 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CENPAP49450 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CENPAP49450 RBPJP6-201ENST00000411556 1431 ntBASIC5.84□□□□□ -1.47
CENPAP49450 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.84□□□□□ -1.47
CENPAP49450 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CENPAP49450 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.84□□□□□ -1.47
CENPAP49450 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.84□□□□□ -1.47
CENPAP49450 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CENPAP49450 RNA5SP321-201ENST00000362722 111 ntBASIC5.84□□□□□ -1.47
CENPAP49450 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.84□□□□□ -1.47
CENPAP49450 EEF1GP6-201ENST00000402309 905 ntBASIC5.84□□□□□ -1.47
CENPAP49450 AL117344.1-201ENST00000407196 616 ntBASIC5.84□□□□□ -1.47
CENPAP49450 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.84□□□□□ -1.47
CENPAP49450 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.84□□□□□ -1.47
CENPAP49450 AL357078.2-201ENST00000416486 427 ntBASIC5.84□□□□□ -1.47
CENPAP49450 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.84□□□□□ -1.47
CENPAP49450 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CENPAP49450 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.84□□□□□ -1.47
CENPAP49450 RPL3P11-201ENST00000434028 1146 ntBASIC5.84□□□□□ -1.47
CENPAP49450 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.84□□□□□ -1.47
CENPAP49450 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms