Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RN7SL649P-201ENST00000496974 275 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCLP35914 OR56A7P-201ENST00000524865 941 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC007494.1-201ENST00000562293 760 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCLP35914 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 GLYATL1P2-202ENST00000588046 902 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AC068768.2-201ENST00000602352 343 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AP001437.1-201ENST00000608783 456 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.07□□□□□ -1.44
HMGCLP35914 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 AL031658.2-201ENST00000616850 651 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 AC016542.2-201ENST00000624201 619 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 MTCO1P28-201ENST00000574177 1528 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HMGCLP35914 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 AC104966.1-201ENST00000467010 1464 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HMGCLP35914 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 HSPD1P8-201ENST00000400121 1658 ntBASIC6.07□□□□□ -1.44
HMGCLP35914 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HMGCLP35914 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
HMGCLP35914 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 RNU6-673P-201ENST00000365084 104 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 RN7SKP187-201ENST00000365536 330 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 SNORA51.9-201ENST00000384295 124 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HMGCLP35914 AL132875.1-201ENST00000403623 949 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCLP35914 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 RPL34P27-201ENST00000428810 349 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 DNAJC19P5-201ENST00000443295 316 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 RPL6P30-201ENST00000443382 862 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCLP35914 AL355032.1-201ENST00000472981 438 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC090142.2-201ENST00000483263 416 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 RN7SKP248-201ENST00000516278 305 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 RNA5SP473-201ENST00000516402 125 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 OR4A6P-201ENST00000534364 970 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC107958.1-201ENST00000556576 290 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AC083837.1-201ENST00000565297 2994 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 AL583832.1-201ENST00000603227 784 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AC073333.2-201ENST00000603589 769 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 AL357562.1-201ENST00000624911 609 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC073488.3-201ENST00000631611 778 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCLP35914 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.06□□□□□ -1.44
HMGCLP35914 AC068769.1-201ENST00000474767 2426 ntBASIC6.06□□□□□ -1.44
HMGCLP35914 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HMGCLP35914 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.06□□□□□ -1.44
HMGCLP35914 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
HMGCLP35914 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HMGCLP35914 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
HMGCLP35914 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.05□□□□□ -1.44
HMGCLP35914 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 NPM1P38-201ENST00000403835 865 ntBASIC6.05□□□□□ -1.44
HMGCLP35914 AL121835.1-201ENST00000404250 354 ntBASIC6.05□□□□□ -1.44
HMGCLP35914 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCLP35914 RNA5SP431-201ENST00000410312 120 ntBASIC6.05□□□□□ -1.44
HMGCLP35914 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.05□□□□□ -1.44
HMGCLP35914 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HMGCLP35914 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.05□□□□□ -1.44
HMGCLP35914 AL731534.1-201ENST00000434711 269 ntBASIC6.05□□□□□ -1.44
HMGCLP35914 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms