Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC6A4P31645 EMC3-AS1-205ENST00000438698 534 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 ELOCP3-201ENST00000439303 348 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC6A4P31645 RAB28P2-201ENST00000454299 641 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC093663.2-201ENST00000484625 313 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 RPL37P23-201ENST00000492641 294 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 RN7SL362P-201ENST00000494228 267 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC091965.3-201ENST00000506236 208 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC6A4P31645 ZNF519P4-201ENST00000514008 125 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 SEC11B-201ENST00000518383 499 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC6A4P31645 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC6A4P31645 AC005000.1-201ENST00000536192 288 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC6A4P31645 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC6A4P31645 MTND1P24-201ENST00000552175 861 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.59□□□□□ -1.35
SLC6A4P31645 MIR3154-201ENST00000577829 84 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.59□□□□□ -1.35
SLC6A4P31645 ZNF92P2-201ENST00000600543 1059 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.59□□□□□ -1.35
SLC6A4P31645 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.59□□□□□ -1.35
SLC6A4P31645 AC073862.4-201ENST00000622982 854 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 AL109659.3-201ENST00000624985 950 ntBASIC6.59□□□□□ -1.35
SLC6A4P31645 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC6A4P31645 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SLC6A4P31645 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SLC6A4P31645 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
SLC6A4P31645 AL359195.2-201ENST00000623657 4412 ntBASIC6.59□□□□□ -1.36
SLC6A4P31645 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SLC6A4P31645 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
SLC6A4P31645 MTCO1P4-201ENST00000520516 1409 ntBASIC6.59□□□□□ -1.36
SLC6A4P31645 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 CASC19-238ENST00000641523 1558 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 RNU1-65P-201ENST00000363919 148 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 RNU6-1257P-201ENST00000384625 110 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 RNU6-1000P-201ENST00000391066 106 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 RPS3AP25-201ENST00000411660 793 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL035422.1-201ENST00000414193 397 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AC099782.1-201ENST00000425889 474 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AC114973.1-201ENST00000429057 632 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 ARL5AP3-201ENST00000439327 386 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 HMGN1P5-201ENST00000448591 263 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 CABYRP1-201ENST00000465493 1045 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 RN7SL369P-201ENST00000477138 299 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
SLC6A4P31645 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 AC090543.1-201ENST00000492168 485 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AC084337.1-201ENST00000524809 686 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.58□□□□□ -1.36
SLC6A4P31645 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AC005332.4-201ENST00000592752 579 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 BNIP3P38-201ENST00000601117 544 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AC097467.4-201ENST00000605504 141 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 RPSAP75-201ENST00000605848 301 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL591926.1-201ENST00000620542 217 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AP003499.2-201ENST00000624100 483 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AC010608.3-201ENST00000625048 527 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 OR6C71P-202ENST00000641886 1107 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 OR7E91P-202ENST00000642062 1198 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.58□□□□□ -1.36
SLC6A4P31645 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
SLC6A4P31645 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SLC6A4P31645 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.58□□□□□ -1.36
SLC6A4P31645 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
SLC6A4P31645 AL136984.1-201ENST00000607611 1893 ntBASIC6.58□□□□□ -1.36
SLC6A4P31645 AL591848.4-201ENST00000567832 3472 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms