Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 RPL23AP37-201ENST00000479658 549 ntBASIC8.03□□□□□ -1.12
VARSP26640 RPS7P6-201ENST00000485777 579 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 AC011352.3-201ENST00000505162 593 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 AC108078.1-201ENST00000508073 725 ntBASIC8.03□□□□□ -1.12
VARSP26640 DKK2-202ENST00000510463 908 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 MTCYBP43-201ENST00000513621 740 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC087360.1-201ENST00000518788 616 ntBASIC8.03□□□□□ -1.12
VARSP26640 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC8.03□□□□□ -1.12
VARSP26640 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 AC025252.2-201ENST00000537470 502 ntBASIC8.03□□□□□ -1.12
VARSP26640 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.03□□□□□ -1.12
VARSP26640 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC8.03□□□□□ -1.12
VARSP26640 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC8.03□□□□□ -1.12
VARSP26640 AC073534.1-201ENST00000598671 1056 ntBASIC8.03□□□□□ -1.12
VARSP26640 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC8.03□□□□□ -1.12
VARSP26640 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC026336.5-201ENST00000624455 738 ntBASIC8.03□□□□□ -1.12
VARSP26640 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 RASSF3-206ENST00000637125 1060 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
VARSP26640 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 AL121835.2-201ENST00000624253 3502 ntBASIC8.03□□□□□ -1.12
VARSP26640 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 ASAP1-IT2-201ENST00000626977 2031 ntBASIC8.03□□□□□ -1.12
VARSP26640 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.03□□□□□ -1.12
VARSP26640 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 DCLRE1C-206ENST00000378254 2485 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
VARSP26640 AC106872.5-201ENST00000508856 1416 ntBASIC8.03□□□□□ -1.12
VARSP26640 AC061975.5-201ENST00000584928 1441 ntBASIC8.03□□□□□ -1.12
VARSP26640 OR4G11P-202ENST00000642116 1414 ntBASIC8.03□□□□□ -1.12
VARSP26640 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 AP002833.3-201ENST00000625075 2265 ntBASIC8.03□□□□□ -1.12
VARSP26640 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.03□□□□□ -1.12
VARSP26640 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.02□□□□□ -1.12
VARSP26640 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
VARSP26640 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
VARSP26640 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.12
VARSP26640 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
VARSP26640 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
VARSP26640 AP004289.1-201ENST00000436307 2205 ntBASIC8.02□□□□□ -1.13
VARSP26640 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARSP26640 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
VARSP26640 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARSP26640 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
VARSP26640 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARSP26640 NAP1L4P1-201ENST00000319092 1157 ntBASIC8.02□□□□□ -1.13
VARSP26640 SYF2-202ENST00000354361 926 ntTSL 2 BASIC8.02□□□□□ -1.13
VARSP26640 RN7SKP37-201ENST00000364494 296 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC073621.2-201ENST00000381380 1024 ntBASIC8.02□□□□□ -1.13
VARSP26640 NPM1P46-201ENST00000399556 865 ntBASIC8.02□□□□□ -1.13
VARSP26640 AL136968.2-201ENST00000407959 354 ntBASIC8.02□□□□□ -1.13
VARSP26640 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC8.02□□□□□ -1.13
VARSP26640 MTND3P17-201ENST00000416968 344 ntBASIC8.02□□□□□ -1.13
VARSP26640 USP9YP27-201ENST00000418455 438 ntBASIC8.02□□□□□ -1.13
VARSP26640 CDC42P6-201ENST00000421246 576 ntBASIC8.02□□□□□ -1.13
VARSP26640 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC8.02□□□□□ -1.13
VARSP26640 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.02□□□□□ -1.13
VARSP26640 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC8.02□□□□□ -1.13
VARSP26640 FMO7P-201ENST00000436045 768 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC234064.1-201ENST00000436312 247 ntBASIC8.02□□□□□ -1.13
VARSP26640 RPL29P7-201ENST00000440227 457 ntBASIC8.02□□□□□ -1.13
VARSP26640 HMGN1P32-201ENST00000441744 256 ntBASIC8.02□□□□□ -1.13
VARSP26640 SFTPA3P-201ENST00000446429 367 ntBASIC8.02□□□□□ -1.13
VARSP26640 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
VARSP26640 HMGB1P16-201ENST00000447155 540 ntBASIC8.02□□□□□ -1.13
VARSP26640 RPL39P6-201ENST00000448289 150 ntBASIC8.02□□□□□ -1.13
VARSP26640 HMGB1P5-202ENST00000451497 985 ntBASIC8.02□□□□□ -1.13
VARSP26640 RPS27P12-201ENST00000464146 258 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC092757.1-201ENST00000467293 467 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC007537.2-201ENST00000472093 511 ntBASIC8.02□□□□□ -1.13
VARSP26640 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
VARSP26640 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
VARSP26640 OR51A1P-201ENST00000511110 946 ntBASIC8.02□□□□□ -1.13
VARSP26640 SNORA70.23-201ENST00000517218 151 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC8.02□□□□□ -1.13
VARSP26640 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.02□□□□□ -1.13
VARSP26640 AP001893.2-201ENST00000526949 202 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.02□□□□□ -1.13
VARSP26640 AC090607.2-201ENST00000560331 695 ntBASIC8.02□□□□□ -1.13
VARSP26640 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.02□□□□□ -1.13
VARSP26640 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.02□□□□□ -1.13
VARSP26640 AC005084.1-201ENST00000605160 304 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms