Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CFTRP13569 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 AL807761.1-201ENST00000417622 171 ntBASIC9.98□□□□□ -0.81
CFTRP13569 CYCSP6-201ENST00000434498 302 ntBASIC9.98□□□□□ -0.81
CFTRP13569 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 RN7SKP66-201ENST00000516681 231 ntBASIC9.98□□□□□ -0.81
CFTRP13569 HNRNPCP1-201ENST00000556181 766 ntBASIC9.98□□□□□ -0.81
CFTRP13569 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.98□□□□□ -0.81
CFTRP13569 MRPS21P7-201ENST00000566937 238 ntBASIC9.98□□□□□ -0.81
CFTRP13569 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 PARP4P1-201ENST00000435945 2337 ntBASIC9.98□□□□□ -0.81
CFTRP13569 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC9.98□□□□□ -0.81
CFTRP13569 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC9.98□□□□□ -0.81
CFTRP13569 RPL7P45-201ENST00000455851 743 ntBASIC9.98□□□□□ -0.81
CFTRP13569 RPL23AP40-201ENST00000487630 390 ntBASIC9.98□□□□□ -0.81
CFTRP13569 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 OR4H6P-201ENST00000563771 921 ntBASIC9.98□□□□□ -0.81
CFTRP13569 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC9.98□□□□□ -0.81
CFTRP13569 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.98□□□□□ -0.81
CFTRP13569 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
CFTRP13569 DPY19L2P2-203ENST00000435536 1858 ntBASIC9.97□□□□□ -0.81
CFTRP13569 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 AF131215.2-201ENST00000531549 1710 ntBASIC9.97□□□□□ -0.81
CFTRP13569 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC9.97□□□□□ -0.81
CFTRP13569 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.97□□□□□ -0.81
CFTRP13569 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 MAPK10-338ENST00000641647 3362 ntBASIC9.97□□□□□ -0.81
CFTRP13569 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 AL136531.3-201ENST00000624378 3658 ntBASIC9.97□□□□□ -0.81
CFTRP13569 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
CFTRP13569 RN7SKP28-201ENST00000364770 305 ntBASIC9.97□□□□□ -0.81
CFTRP13569 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
CFTRP13569 AC006335.2-201ENST00000437993 330 ntBASIC9.97□□□□□ -0.81
CFTRP13569 HIGD1AP8-201ENST00000453927 274 ntBASIC9.97□□□□□ -0.81
CFTRP13569 OR11J2P-201ENST00000555298 907 ntBASIC9.97□□□□□ -0.81
CFTRP13569 AC024589.2-201ENST00000605642 1294 ntBASIC9.97□□□□□ -0.81
CFTRP13569 AC000068.2-201ENST00000608816 460 ntBASIC9.97□□□□□ -0.81
CFTRP13569 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC9.97□□□□□ -0.81
CFTRP13569 AC112255.1-201ENST00000624070 2493 ntBASIC9.97□□□□□ -0.81
CFTRP13569 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC9.96□□□□□ -0.81
CFTRP13569 AOX3P-204ENST00000491025 2107 ntBASIC9.96□□□□□ -0.81
CFTRP13569 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
CFTRP13569 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.96□□□□□ -0.81
CFTRP13569 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
CFTRP13569 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.96□□□□□ -0.82
CFTRP13569 FAM32BP-201ENST00000344033 333 ntBASIC9.96□□□□□ -0.82
CFTRP13569 RNA5SP335-201ENST00000363817 110 ntBASIC9.96□□□□□ -0.82
CFTRP13569 RN7SKP103-201ENST00000363848 320 ntBASIC9.96□□□□□ -0.82
CFTRP13569 RN7SKP279-201ENST00000411383 298 ntBASIC9.96□□□□□ -0.82
CFTRP13569 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.96□□□□□ -0.82
CFTRP13569 AP000547.1-201ENST00000454360 617 ntBASIC9.96□□□□□ -0.82
CFTRP13569 AC004129.2-201ENST00000457229 287 ntBASIC9.96□□□□□ -0.82
CFTRP13569 AC147055.3-201ENST00000510547 851 ntBASIC9.96□□□□□ -0.82
CFTRP13569 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC9.96□□□□□ -0.82
CFTRP13569 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC9.96□□□□□ -0.82
CFTRP13569 AC126615.2-201ENST00000553003 515 ntBASIC9.96□□□□□ -0.82
CFTRP13569 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC9.96□□□□□ -0.82
CFTRP13569 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC9.96□□□□□ -0.82
CFTRP13569 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC9.96□□□□□ -0.82
CFTRP13569 AC132068.1-201ENST00000623805 459 ntBASIC9.96□□□□□ -0.82
CFTRP13569 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
CFTRP13569 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.95□□□□□ -0.82
CFTRP13569 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC9.95□□□□□ -0.82
CFTRP13569 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CFTRP13569 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC9.95□□□□□ -0.82
CFTRP13569 AC079753.1-201ENST00000623243 3868 ntBASIC9.95□□□□□ -0.82
CFTRP13569 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC9.95□□□□□ -0.82
CFTRP13569 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CFTRP13569 UGT2B27P-201ENST00000505092 1620 ntBASIC9.95□□□□□ -0.82
CFTRP13569 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CFTRP13569 RPL23P2-201ENST00000320371 421 ntBASIC9.95□□□□□ -0.82
CFTRP13569 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CFTRP13569 RNU1-77P-201ENST00000390868 162 ntBASIC9.95□□□□□ -0.82
CFTRP13569 RMRPP5-201ENST00000411156 267 ntBASIC9.95□□□□□ -0.82
CFTRP13569 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC9.95□□□□□ -0.82
CFTRP13569 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.95□□□□□ -0.82
CFTRP13569 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC9.95□□□□□ -0.82
CFTRP13569 CCDC11P1-201ENST00000503137 1162 ntBASIC9.95□□□□□ -0.82
CFTRP13569 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.95□□□□□ -0.82
CFTRP13569 RNU6ATAC24P-201ENST00000516811 135 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms