Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 AL391261.1-201ENST00000555712 1479 ntBASIC6.44□□□□□ -1.38
CHRNB1P11230 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHRNB1P11230 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNB1P11230 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CHRNB1P11230 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CHRNB1P11230 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHRNB1P11230 RNF19BPY-201ENST00000458209 1550 ntBASIC6.44□□□□□ -1.38
CHRNB1P11230 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.44□□□□□ -1.38
CHRNB1P11230 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNB1P11230 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC010329.1-201ENST00000593903 8328 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC010401.2-201ENST00000575137 4934 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CHRNB1P11230 SNORA40.4-201ENST00000390971 128 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC244033.1-201ENST00000426826 870 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC091390.2-201ENST00000432573 374 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AL500527.1-201ENST00000448532 255 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 HIGD1AP16-201ENST00000450986 258 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 CFL1P4-201ENST00000451536 498 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 RN7SL561P-201ENST00000488553 281 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 RPS4XP14-201ENST00000493072 781 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC095057.1-201ENST00000507583 168 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC083906.1-201ENST00000509298 406 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 Y_RNA.667-201ENST00000516212 107 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 RNA5SP438-201ENST00000516561 112 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC019227.1-201ENST00000526902 510 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC090022.1-201ENST00000546569 311 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 RPA2P1-201ENST00000556557 721 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC067805.1-201ENST00000559344 470 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC122134.1-202ENST00000569111 1201 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC005229.3-201ENST00000603438 323 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 RPL21P136-201ENST00000605378 396 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 AC005972.3-201ENST00000606304 481 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 FAM72A-208ENST00000607379 1139 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC245014.3-201ENST00000618589 347 ntBASIC6.43□□□□□ -1.38
CHRNB1P11230 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.43□□□□□ -1.38
CHRNB1P11230 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CHRNB1P11230 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CHRNB1P11230 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CHRNB1P11230 CASC19-228ENST00000641414 1684 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
CHRNB1P11230 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
CHRNB1P11230 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CHRNB1P11230 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CHRNB1P11230 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CHRNB1P11230 AC096537.2-201ENST00000413707 714 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.42□□□□□ -1.38
CHRNB1P11230 RPS7P14-201ENST00000426405 583 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.42□□□□□ -1.38
CHRNB1P11230 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.42□□□□□ -1.38
CHRNB1P11230 ACA64.1-201ENST00000459171 127 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 AC011476.1-201ENST00000466725 307 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AP003396.4-201ENST00000527574 265 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AC027544.3-201ENST00000535082 757 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.42□□□□□ -1.38
CHRNB1P11230 AC090079.2-201ENST00000575289 768 ntBASIC6.42□□□□□ -1.38
CHRNB1P11230 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms