Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 AC062029.1-202ENST00000606164 3651 ntBASIC6.75□□□□□ -1.33
MMP3P08254 AL591848.4-201ENST00000567832 3472 ntBASIC6.75□□□□□ -1.33
MMP3P08254 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
MMP3P08254 FUNDC2P3-201ENST00000334716 533 ntBASIC6.75□□□□□ -1.33
MMP3P08254 RNA5SP500-201ENST00000364486 119 ntBASIC6.75□□□□□ -1.33
MMP3P08254 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.75□□□□□ -1.33
MMP3P08254 KIF4CP-201ENST00000422742 1279 ntBASIC6.75□□□□□ -1.33
MMP3P08254 BX119321.1-201ENST00000428912 797 ntBASIC6.75□□□□□ -1.33
MMP3P08254 LYPLA1P1-201ENST00000434514 622 ntBASIC6.75□□□□□ -1.33
MMP3P08254 SUMO2P3-201ENST00000438311 288 ntBASIC6.75□□□□□ -1.33
MMP3P08254 AP000281.1-201ENST00000444036 316 ntBASIC6.75□□□□□ -1.33
MMP3P08254 NPM1P19-201ENST00000450070 712 ntBASIC6.75□□□□□ -1.33
MMP3P08254 RPS27AP3-201ENST00000453803 454 ntBASIC6.75□□□□□ -1.33
MMP3P08254 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.75□□□□□ -1.33
MMP3P08254 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 AC124945.1-201ENST00000485133 188 ntBASIC6.75□□□□□ -1.33
MMP3P08254 RN7SL284P-201ENST00000498823 275 ntBASIC6.75□□□□□ -1.33
MMP3P08254 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.75□□□□□ -1.33
MMP3P08254 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.75□□□□□ -1.33
MMP3P08254 OR56A7P-201ENST00000524865 941 ntBASIC6.75□□□□□ -1.33
MMP3P08254 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.75□□□□□ -1.33
MMP3P08254 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.75□□□□□ -1.33
MMP3P08254 NPM1P45-201ENST00000583151 559 ntBASIC6.75□□□□□ -1.33
MMP3P08254 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.75□□□□□ -1.33
MMP3P08254 AL352984.2-201ENST00000611153 546 ntBASIC6.75□□□□□ -1.33
MMP3P08254 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.75□□□□□ -1.33
MMP3P08254 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
MMP3P08254 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
MMP3P08254 CIR1P2-201ENST00000514821 1342 ntBASIC6.75□□□□□ -1.33
MMP3P08254 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 AC092821.3-202ENST00000641304 2767 ntBASIC6.74□□□□□ -1.33
MMP3P08254 AC022905.1-201ENST00000503430 3048 ntBASIC6.74□□□□□ -1.33
MMP3P08254 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 AC011369.2-201ENST00000624423 1567 ntBASIC6.74□□□□□ -1.33
MMP3P08254 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
MMP3P08254 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.74□□□□□ -1.33
MMP3P08254 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 AC240504.1-201ENST00000395709 845 ntBASIC6.74□□□□□ -1.33
MMP3P08254 OR7E101P-201ENST00000400428 513 ntBASIC6.74□□□□□ -1.33
MMP3P08254 SNRPEP6-201ENST00000407465 277 ntBASIC6.74□□□□□ -1.33
MMP3P08254 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.74□□□□□ -1.33
MMP3P08254 DNAJC19P5-201ENST00000443295 316 ntBASIC6.74□□□□□ -1.33
MMP3P08254 AC011742.2-201ENST00000443818 352 ntBASIC6.74□□□□□ -1.33
MMP3P08254 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.74□□□□□ -1.33
MMP3P08254 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.74□□□□□ -1.33
MMP3P08254 TMEM97P2-201ENST00000517841 403 ntBASIC6.74□□□□□ -1.33
MMP3P08254 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 AC110056.1-201ENST00000525759 911 ntBASIC6.74□□□□□ -1.33
MMP3P08254 OR6M2P-201ENST00000529831 871 ntBASIC6.74□□□□□ -1.33
MMP3P08254 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.74□□□□□ -1.33
MMP3P08254 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
MMP3P08254 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
MMP3P08254 SNORD95-201ENST00000579879 68 ntBASIC6.74□□□□□ -1.33
MMP3P08254 MIR4443-201ENST00000585052 53 ntBASIC6.74□□□□□ -1.33
MMP3P08254 AL512624.1-201ENST00000613638 469 ntBASIC6.74□□□□□ -1.33
MMP3P08254 AC004477.3-201ENST00000614061 590 ntBASIC6.74□□□□□ -1.33
MMP3P08254 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 AC116667.2-201ENST00000641075 823 ntBASIC6.74□□□□□ -1.33
MMP3P08254 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
MMP3P08254 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 RARSP1-201ENST00000542842 1418 ntBASIC6.74□□□□□ -1.33
MMP3P08254 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
MMP3P08254 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
MMP3P08254 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
MMP3P08254 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
MMP3P08254 Z93929.1-201ENST00000418200 1475 ntBASIC6.73□□□□□ -1.33
MMP3P08254 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
MMP3P08254 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
MMP3P08254 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.73□□□□□ -1.33
MMP3P08254 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.73□□□□□ -1.33
MMP3P08254 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
MMP3P08254 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.73□□□□□ -1.33
MMP3P08254 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.73□□□□□ -1.33
MMP3P08254 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.73□□□□□ -1.33
MMP3P08254 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
MMP3P08254 SELENOWP1-201ENST00000322792 252 ntBASIC6.73□□□□□ -1.33
MMP3P08254 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
MMP3P08254 RN7SKP77-201ENST00000363261 353 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms