Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MSI1O43347 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.45□□□□□ -1.38
MSI1O43347 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MSI1O43347 AC024587.1-201ENST00000505925 2157 ntBASIC6.45□□□□□ -1.38
MSI1O43347 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.45□□□□□ -1.38
MSI1O43347 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
MSI1O43347 AC018765.1-201ENST00000623357 3446 ntBASIC6.45□□□□□ -1.38
MSI1O43347 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.45□□□□□ -1.38
MSI1O43347 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
MSI1O43347 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.45□□□□□ -1.38
MSI1O43347 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.45□□□□□ -1.38
MSI1O43347 AC110373.1-201ENST00000505994 3505 ntBASIC6.45□□□□□ -1.38
MSI1O43347 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.44□□□□□ -1.38
MSI1O43347 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.44□□□□□ -1.38
MSI1O43347 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 RPL23AP18-201ENST00000416139 468 ntBASIC6.44□□□□□ -1.38
MSI1O43347 IGLV3-4-201ENST00000432300 244 ntBASIC6.44□□□□□ -1.38
MSI1O43347 PNKDP1-201ENST00000435914 430 ntBASIC6.44□□□□□ -1.38
MSI1O43347 OR3D1P-201ENST00000438288 955 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AMYP1-201ENST00000440059 1023 ntBASIC6.44□□□□□ -1.38
MSI1O43347 H3F3BP1-201ENST00000440551 403 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AL355355.1-201ENST00000442900 793 ntBASIC6.44□□□□□ -1.38
MSI1O43347 RPS27AP3-201ENST00000453803 454 ntBASIC6.44□□□□□ -1.38
MSI1O43347 Z83838.1-202ENST00000456225 839 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC073594.1-201ENST00000462065 364 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC128716.1-201ENST00000475129 166 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AL158068.1-201ENST00000506116 616 ntBASIC6.44□□□□□ -1.38
MSI1O43347 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.44□□□□□ -1.38
MSI1O43347 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 IGKV3D-25-201ENST00000519599 235 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 AC021269.1-201ENST00000526860 705 ntBASIC6.44□□□□□ -1.38
MSI1O43347 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.44□□□□□ -1.38
MSI1O43347 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.44□□□□□ -1.38
MSI1O43347 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
MSI1O43347 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 RNU4ATAC-201ENST00000580972 127 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC092944.2-201ENST00000605443 889 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC005972.3-201ENST00000606304 481 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC092681.3-201ENST00000609463 678 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC018659.2-201ENST00000624690 715 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC091948.2-201ENST00000636510 279 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AC093297.3-201ENST00000607056 2517 ntBASIC6.44□□□□□ -1.38
MSI1O43347 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.44□□□□□ -1.38
MSI1O43347 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
MSI1O43347 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MSI1O43347 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.44□□□□□ -1.38
MSI1O43347 AL354854.1-201ENST00000455940 1363 ntBASIC6.44□□□□□ -1.38
MSI1O43347 MTCO1P22-201ENST00000604619 1360 ntBASIC6.44□□□□□ -1.38
MSI1O43347 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MSI1O43347 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MSI1O43347 RNA5SP514-201ENST00000363717 111 ntBASIC6.43□□□□□ -1.38
MSI1O43347 SNORA51.9-201ENST00000384295 124 ntBASIC6.43□□□□□ -1.38
MSI1O43347 SNORA77.2-201ENST00000408571 112 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AC013470.3-201ENST00000420252 1194 ntBASIC6.43□□□□□ -1.38
MSI1O43347 TRGV7-201ENST00000427089 353 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 RN7SL221P-201ENST00000466190 281 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.43□□□□□ -1.38
MSI1O43347 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.43□□□□□ -1.38
MSI1O43347 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MSI1O43347 AC026688.1-201ENST00000520639 1168 ntBASIC6.43□□□□□ -1.38
MSI1O43347 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.43□□□□□ -1.38
MSI1O43347 RPA2P3-201ENST00000533268 770 ntBASIC6.43□□□□□ -1.38
MSI1O43347 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MSI1O43347 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 AC090115.2-201ENST00000548060 883 ntBASIC6.43□□□□□ -1.38
MSI1O43347 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.43□□□□□ -1.38
MSI1O43347 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.43□□□□□ -1.38
MSI1O43347 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms