Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RFXAPO00287 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFXAPO00287 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
RFXAPO00287 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
RFXAPO00287 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RFXAPO00287 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFXAPO00287 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RFXAPO00287 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RFXAPO00287 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.09□□□□□ -1.28
RFXAPO00287 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
RFXAPO00287 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
RFXAPO00287 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
RFXAPO00287 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.08□□□□□ -1.28
RFXAPO00287 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 SMG1P5-202ENST00000529428 4219 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 SMG1P2-201ENST00000566127 4221 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 SPATA31C2-201ENST00000324915 3777 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
RFXAPO00287 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 AP003119.3-201ENST00000566747 4192 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 GAPDHP15-201ENST00000398586 975 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 RNU6-564P-201ENST00000410983 104 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 RN7SKP108-201ENST00000411367 328 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 RPL7AP14-201ENST00000424041 802 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 NANOGP5-201ENST00000424456 877 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 Z73417.1-201ENST00000447373 778 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 MTND2P19-201ENST00000449129 1012 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 RPL31P15-201ENST00000449770 338 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC234771.3-201ENST00000454984 622 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.08□□□□□ -1.28
RFXAPO00287 MORF4L2P1-201ENST00000503761 858 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 SNORD46.2-201ENST00000516021 102 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 RNU6-311P-201ENST00000516224 102 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 NAT2-202ENST00000520116 716 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 ZNF321P-202ENST00000550843 495 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 MRPS21P8-201ENST00000569196 235 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC008507.3-201ENST00000585753 472 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC067959.1-201ENST00000604334 379 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.08□□□□□ -1.28
RFXAPO00287 AP001264.1-201ENST00000620602 703 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC129915.3-201ENST00000634128 948 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 AC079776.5-201ENST00000641920 211 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 BX649567.1-201ENST00000642071 1134 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.08□□□□□ -1.28
RFXAPO00287 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 HSPD1P14-201ENST00000432666 1618 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 AP003175.1-201ENST00000641383 6658 ntBASIC7.08□□□□□ -1.28
RFXAPO00287 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RFXAPO00287 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
RFXAPO00287 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.08□□□□□ -1.28
RFXAPO00287 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.07□□□□□ -1.28
RFXAPO00287 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
RFXAPO00287 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RFXAPO00287 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RFXAPO00287 TMSB4XP4-201ENST00000323496 618 ntBASIC7.07□□□□□ -1.28
RFXAPO00287 AC023490.2-201ENST00000359859 470 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms