Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
PTCH2Q9Y6C5 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 RACGAP1P-201ENST00000550663 1879 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AL590762.1-201ENST00000391782 432 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 RNU4-27P-201ENST00000410889 139 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 USP12PY-201ENST00000427677 1064 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 MTCYBP15-201ENST00000433123 1127 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 RPSAP37-201ENST00000470913 821 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC098847.1-201ENST00000473094 348 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 RN7SL717P-201ENST00000478343 297 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC098862.1-201ENST00000504991 413 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 IGKV2-19-201ENST00000518132 283 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 EEF1B2P2-201ENST00000519625 676 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 MTND2P32-201ENST00000521584 1038 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC008429.2-201ENST00000523057 864 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC007346.1-201ENST00000569208 867 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 MIR4489-201ENST00000578869 62 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC009237.12-201ENST00000604755 742 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AL021707.7-201ENST00000607991 416 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC093875.1-201ENST00000623688 504 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC097655.1-201ENST00000635075 318 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 LINC02495-203ENST00000636704 242 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AL049767.1-202ENST00000637826 242 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 AC007938.1-201ENST00000562524 2902 ntBASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
PTCH2Q9Y6C5 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL356317.1-201ENST00000396110 1436 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL355974.1-201ENST00000618896 1708 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 SHQ1P1-201ENST00000437111 1544 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 RN7SKP62-201ENST00000384539 329 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 GSTA12P-201ENST00000402398 508 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 MTCO2P8-201ENST00000412213 658 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL663061.1-201ENST00000416625 580 ntBASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.44□□□□□ -1.22
PTCH2Q9Y6C5 AC239367.3-201ENST00000428996 814 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms