Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 MYL6P5-201ENST00000412707 459 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 MRPL53P1-201ENST00000414323 319 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 FABP7P2-201ENST00000429946 379 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC015983.1-201ENST00000441577 373 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AL450996.1-201ENST00000445574 1202 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 RN7SL72P-201ENST00000460697 269 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC004815.1-201ENST00000484185 331 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC074087.1-201ENST00000512059 724 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC007494.1-201ENST00000562293 760 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 FAM27E4-201ENST00000605259 342 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 Mico1.1-201ENST00000611698 204 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AL445670.1-201ENST00000618889 801 ntBASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
SHANK2Q9UPX8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AP003119.3-201ENST00000566747 4192 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AL645927.1-201ENST00000396783 406 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 OR2W4P-201ENST00000406496 926 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AC113412.1-201ENST00000425840 504 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AC004890.3-201ENST00000605566 1095 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 FBXL21-201ENST00000297158 1305 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 AL391262.1-201ENST00000556558 1992 ntBASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SHANK2Q9UPX8 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 GAPDHP24-201ENST00000328713 983 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 SNORA56-201ENST00000383966 129 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 AC008171.1-201ENST00000395058 200 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 SPRYD7P1-201ENST00000443861 570 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 CT45A11P-201ENST00000448043 1134 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 CYP4F27P-201ENST00000514557 494 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 MIR4301-201ENST00000577203 66 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 AC012557.1-201ENST00000607115 611 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 PABPC1P6-201ENST00000445594 1829 ntBASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SHANK2Q9UPX8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 CFL1P1-202ENST00000432948 411 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AL162739.1-201ENST00000450606 307 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 FRG2FP-204ENST00000453982 852 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 RAB28P2-201ENST00000454299 641 ntBASIC8.84□□□□□ -0.99
SHANK2Q9UPX8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms