Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AL603766.1-201ENST00000407763 664 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 YME1L1P1-201ENST00000429435 297 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 MRPL35P2-201ENST00000448009 511 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AC073610.1-201ENST00000489971 396 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AP005119.2-201ENST00000579735 1105 ntBASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC2.37□□□□□ -2.03
MACF1Q9UPN3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 TRIM51HP-202ENST00000530412 1823 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SNORA43.1-201ENST00000364863 140 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MIR1272-201ENST00000408106 129 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CRYBB2P1-203ENST00000415709 538 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC021006.3-201ENST00000530771 192 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AP005901.4-201ENST00000577336 569 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC069366.1-201ENST00000583159 838 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LINC01278-205ENST00000609401 2886 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 Z97989.1-201ENST00000531702 2421 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AL133372.1-201ENST00000493565 745 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AL356986.1-201ENST00000604085 341 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LRRC7-201ENST00000035383 5000 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MAPK10-383ENST00000642032 3390 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 Z92545.1-201ENST00000411782 234 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RAD23BP1-201ENST00000421404 1227 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AL139384.2-201ENST00000613809 3590 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC005839.1-201ENST00000624148 3213 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC011369.2-201ENST00000624423 1567 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC092964.1-201ENST00000623304 1399 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RN7SKP149-201ENST00000363008 344 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 RNU4-25P-201ENST00000410569 230 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MRPL35P4-201ENST00000453682 566 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 MIR3189-201ENST00000578735 73 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC2.36□□□□□ -2.03
MACF1Q9UPN3 AL445567.2-201ENST00000618935 498 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC2.36□□□□□ -2.03
MACF1Q9UPN3 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms