Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC012512.1-201ENST00000446594 718 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC002075.1-201ENST00000457396 676 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC015864.1-201ENST00000496512 544 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC034205.1-201ENST00000520621 638 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 PARP1P2-201ENST00000556806 195 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 AC103792.1-201ENST00000603591 919 ntBASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC9.27□□□□□ -0.93
RIMBP3Q9UFD9 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC011815.2-201ENST00000618230 2021 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ZNF101P1-201ENST00000435701 1720 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AF131215.2-201ENST00000531549 1710 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 RNA5SP123-201ENST00000363244 119 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 MIR1193-201ENST00000408109 78 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC008072.1-201ENST00000434254 824 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC034236.1-201ENST00000469891 373 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 HSPE1P2-201ENST00000554777 306 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 uc_338.26-201ENST00000612659 160 ntBASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
RIMBP3Q9UFD9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 RNA5SP30-201ENST00000365552 115 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 CYCSP42-201ENST00000450823 238 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 ATP5A1P7-201ENST00000453978 1279 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC022034.3-201ENST00000471393 478 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 MIR4260-201ENST00000583107 67 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC063977.5-201ENST00000601044 974 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC090527.3-201ENST00000619041 548 ntBASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 NHS-204ENST00000615422 8860 ntTSL 5 BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
RIMBP3Q9UFD9 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 CSMD1-202ENST00000400186 10938 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 CSMD1-217ENST00000602723 10938 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 MIR23B-201ENST00000384832 97 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 RPL18P10-201ENST00000425606 538 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AL513533.1-201ENST00000453728 415 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC073610.1-201ENST00000489971 396 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms