Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 TMSB4XP4-201ENST00000323496 618 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 RNU4-64P-201ENST00000410795 131 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 RPL35AP31-201ENST00000418340 337 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 CHEK2P5-201ENST00000423877 246 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 HIGD1AP16-201ENST00000450986 258 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 OR4A6P-201ENST00000534364 970 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AC018558.5-201ENST00000565840 952 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AC092121.1-201ENST00000569452 202 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AC073488.3-201ENST00000631611 778 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC88CQ9P219 AC092692.1-201ENST00000623625 2595 ntBASIC5.8□□□□□ -1.48
CCDC88CQ9P219 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AL359955.1-201ENST00000455242 3275 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 TMSB4XP2-201ENST00000335179 210 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 RNU1-134P-201ENST00000362935 165 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 MIR1203-201ENST00000408812 85 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 NMD3P2-201ENST00000421815 761 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC110602.1-201ENST00000437414 318 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 OR2L9P-201ENST00000444456 913 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC008691.1-209ENST00000642094 814 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 SDC4P-201ENST00000453285 601 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LDHAP1-201ENST00000509421 992 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 RPL7L1P4-201ENST00000513004 707 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 PRMT5P1-201ENST00000514351 598 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 CYP4F27P-201ENST00000514557 494 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC087360.1-201ENST00000518788 616 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 AL356801.1-201ENST00000559320 294 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 OR7A1P-202ENST00000641542 1158 ntBASIC5.79□□□□□ -1.48
CCDC88CQ9P219 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC88CQ9P219 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AC024587.1-201ENST00000505925 2157 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms