Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 LSM3P4-201ENST00000502948 309 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC008629.2-201ENST00000503783 483 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 OR7E158P-201ENST00000524483 910 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 BCAS2P1-201ENST00000528022 632 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 RPA2P1-201ENST00000556557 721 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 AL049779.3-201ENST00000557141 606 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC245014.3-201ENST00000618589 347 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC005225.5-201ENST00000623547 2225 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 THAP12P9-201ENST00000503971 2360 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 CASC19-238ENST00000641523 1558 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AL355377.1-201ENST00000621125 1653 ntBASIC6.39□□□□□ -1.39
CISHQ9NSE2 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CISHQ9NSE2 AC010329.1-201ENST00000593903 8328 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AL662795.2-201ENST00000624252 3706 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CISHQ9NSE2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 RN7SKP77-201ENST00000363261 353 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 RNA5SP211-201ENST00000365516 117 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 RPL23AP17-201ENST00000401064 499 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 VN1R12P-201ENST00000403778 876 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC099677.3-201ENST00000427081 395 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CISHQ9NSE2 CFL1P4-201ENST00000451536 498 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 RN7SKP248-201ENST00000516278 305 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 AP003396.4-201ENST00000527574 265 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC079905.1-201ENST00000549280 475 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC005244.1-201ENST00000582566 339 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC090236.2-201ENST00000587933 1101 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 AC108673.3-201ENST00000609183 335 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 AL021918.2-201ENST00000613415 194 ntBASIC6.38□□□□□ -1.39
CISHQ9NSE2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
CISHQ9NSE2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 CAP1P2-201ENST00000417455 1409 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CISHQ9NSE2 SELENOWP1-201ENST00000322792 252 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 CXADRP1-201ENST00000398098 1095 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AL096800.1-201ENST00000405326 893 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC068138.1-201ENST00000412635 217 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 KIF4CP-201ENST00000422742 1279 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AL365220.1-201ENST00000432923 399 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AL445928.1-201ENST00000435545 222 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 BMS1P10-201ENST00000443754 1120 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 CST12P-201ENST00000457644 362 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 RN7SKP288-201ENST00000516227 268 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC007956.1-201ENST00000555623 542 ntBASIC6.37□□□□□ -1.39
CISHQ9NSE2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.37□□□□□ -1.39
CISHQ9NSE2 AC134669.1-201ENST00000581275 672 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms