Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 EIF3EP1-201ENST00000433978 1316 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 RNA5SP510-201ENST00000364697 99 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 RN7SKP144-201ENST00000411108 279 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 SLC20A1P1-201ENST00000413906 956 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 HLA-DPA3-207ENST00000454398 229 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AL158068.1-201ENST00000506116 616 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC011411.1-201ENST00000509592 876 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC006499.4-201ENST00000510947 694 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 PRMT5P1-201ENST00000514351 598 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC073333.2-201ENST00000603589 769 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 TCL6_3.1-201ENST00000619064 137 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC004836.1-201ENST00000623032 634 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC129778.1-202ENST00000623812 261 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AL591379.1-207ENST00000635982 261 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC007114.2-201ENST00000576014 4281 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.28□□□□□ -1.4
TM9SF3Q9HD45 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.27□□□□□ -1.4
TM9SF3Q9HD45 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC006511.3-201ENST00000624929 1783 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 OR7E25P-201ENST00000344844 931 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AL050305.1-201ENST00000399993 1230 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC104843.2-201ENST00000427666 297 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC023141.3-201ENST00000436698 278 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC073109.1-201ENST00000445066 978 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AL359839.1-201ENST00000451975 1160 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 RN7SL326P-201ENST00000477493 296 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC060775.1-201ENST00000518241 520 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 MIR4420-201ENST00000583944 77 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC129915.3-201ENST00000634128 948 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 MIR4302-201ENST00000638058 60 ntBASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM9SF3Q9HD45 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 KARSP1-201ENST00000451871 1752 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC006213.6-201ENST00000623722 4179 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 AC018717.1-201ENST00000457712 1505 ntBASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM9SF3Q9HD45 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms