Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.17□□□□□ -1.42
VMP1Q96GC9 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VMP1Q96GC9 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.17□□□□□ -1.42
VMP1Q96GC9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AP005435.3-201ENST00000531260 3198 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 RNU1-59P-201ENST00000364829 162 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 RPL12P23-201ENST00000405880 490 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC116036.1-201ENST00000412199 367 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL645939.3-201ENST00000435408 225 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC013403.1-201ENST00000436954 263 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 RPL12P18-201ENST00000437175 325 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 COL11A2P1-205ENST00000441798 676 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL139156.3-201ENST00000454802 394 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 SEPT7P6-201ENST00000469999 1143 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC138517.1-201ENST00000515724 568 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL162632.2-201ENST00000553933 399 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC114477.1-201ENST00000605097 605 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AC097467.4-201ENST00000605504 141 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 SNORD96A-201ENST00000606577 79 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 U1.25-201ENST00000614085 162 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 U1.31-201ENST00000620022 160 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 AL161756.3-201ENST00000641216 2071 ntBASIC6.16□□□□□ -1.42
VMP1Q96GC9 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VMP1Q96GC9 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.16□□□□□ -1.42
VMP1Q96GC9 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC107021.2-201ENST00000567714 2095 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 OR7A2P-201ENST00000304105 930 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 U3.52-201ENST00000384034 216 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 MIR191-201ENST00000384873 92 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 RN7SKP146-201ENST00000410242 334 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 RPS26P38-201ENST00000414476 348 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AL359092.1-201ENST00000417156 265 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 GNG5P5-201ENST00000420444 220 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 SETP10-201ENST00000424368 814 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 FCF1P7-201ENST00000451185 558 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 SULT1D1P-201ENST00000458020 882 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 RN7SL413P-201ENST00000482700 297 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 RPL9P15-201ENST00000491096 532 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC093870.1-201ENST00000506837 213 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VMP1Q96GC9 BTG1P1-201ENST00000540396 508 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC037479.1-201ENST00000558361 625 ntBASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.15□□□□□ -1.42
VMP1Q96GC9 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms