Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL445670.1-201ENST00000618889 801 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 AL355480.1-201ENST00000629041 99 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SNORA17.5-201ENST00000630429 132 ntBASIC9.25□□□□□ -0.93
VPS8Q8N3P4 ATM-229ENST00000639953 587 ntTSL 5 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC9.25□□□□□ -0.93
VPS8Q8N3P4 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 RPS3AP2-201ENST00000407190 754 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 AL357752.1-201ENST00000412817 349 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 OR5W1P-201ENST00000423705 938 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 AL445665.1-202ENST00000452436 324 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 RN7SL273P-201ENST00000481561 299 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 GNG2-208ENST00000554875 430 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 FAM72A-208ENST00000607379 1139 ntBASIC9.24□□□□□ -0.93
VPS8Q8N3P4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.24□□□□□ -0.93
VPS8Q8N3P4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AL603882.1-201ENST00000463059 681 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 PFN1P6-201ENST00000476786 399 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RPS3AP15-201ENST00000483874 781 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 TRBV5-2-201ENST00000489095 273 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AC079600.1-201ENST00000550326 297 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 MIR6862-1-201ENST00000613016 70 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 MIR6862-2-201ENST00000614755 70 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RN7SL544P-201ENST00000617232 284 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RN7SL763P-201ENST00000620922 284 ntBASIC9.23□□□□□ -0.93
VPS8Q8N3P4 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
VPS8Q8N3P4 RNA5SP510-201ENST00000364697 99 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC092642.1-201ENST00000392417 425 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 SETP20-201ENST00000457046 852 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AL161756.3-201ENST00000641216 2071 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms