Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 CDY11P-201ENST00000447168 1651 ntBASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.72□□□□□ -1.49
TMEM53Q6P2H8 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
TMEM53Q6P2H8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AL445213.1-201ENST00000412589 747 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 RPS27AP6-201ENST00000427962 448 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CCNJP1-201ENST00000450600 1149 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC005165.2-201ENST00000466070 380 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC093719.1-201ENST00000480427 441 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 RN7SL413P-201ENST00000482700 297 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC022206.1-201ENST00000495947 347 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 TMEM97P2-201ENST00000517841 403 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 OR9G2P-201ENST00000533326 880 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC063977.7-201ENST00000594454 337 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AC073488.9-201ENST00000631601 754 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 AL136984.1-201ENST00000607611 1893 ntBASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.71□□□□□ -1.5
TMEM53Q6P2H8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 RPL5P20-201ENST00000403848 896 ntBASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AL033519.1-201ENST00000407266 307 ntBASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 RPL23AP85-201ENST00000421838 433 ntBASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 VN1R38P-201ENST00000450265 887 ntBASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 AC022415.1-202ENST00000486612 523 ntBASIC5.7□□□□□ -1.5
TMEM53Q6P2H8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms