Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 IGLV3-30-201ENST00000524362 298 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 OR1F2P-201ENST00000570470 933 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AC234771.5-201ENST00000600161 514 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AC010245.2-201ENST00000606908 1167 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 AC020978.8-201ENST00000571975 3022 ntBASIC5.9□□□□□ -1.47
RIF1Q5UIP0 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RIF1Q5UIP0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 XRCC6P4-201ENST00000518193 2067 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AL389915.2-201ENST00000454576 441 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 SNORA43.1-201ENST00000364863 140 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 MIR4436B2-201ENST00000581415 91 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 MIR4436B1-201ENST00000583272 91 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
RIF1Q5UIP0 AP005139.1-201ENST00000580702 1647 ntBASIC5.89□□□□□ -1.47
RIF1Q5UIP0 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 OLMALINC-203ENST00000641087 3779 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 NDUFA5P9-201ENST00000472609 340 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 LINC01739-205ENST00000641890 573 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC024587.1-201ENST00000505925 2157 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 APP-206ENST00000359726 3294 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC092647.3-201ENST00000443044 633 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 MIR7703-201ENST00000620784 77 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 AP002799.1-201ENST00000623552 423 ntBASIC5.88□□□□□ -1.47
RIF1Q5UIP0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RIF1Q5UIP0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms