Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
SNAPC4Q5SXM2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 MIR640-201ENST00000385086 96 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AL133173.1-201ENST00000423458 397 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AC097721.1-201ENST00000427150 1253 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 RPL32P33-201ENST00000487023 394 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 RPS21P4-201ENST00000487122 248 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AC073916.1-201ENST00000545095 130 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 GSTP1P1-201ENST00000548078 319 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 UGT2B27P-201ENST00000505092 1620 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 RPL7L1P9-201ENST00000431298 745 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 RBM22P12-201ENST00000567098 1255 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 AL731566.2-201ENST00000618971 317 ntBASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.66□□□□□ -0.86
SNAPC4Q5SXM2 MALAT1-202ENST00000534336 8708 ntBASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 AC087516.1-201ENST00000561236 2428 ntBASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
SNAPC4Q5SXM2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 RNA5SP333-201ENST00000363466 118 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 RNA5SP334-201ENST00000364825 118 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 FAR2P2-201ENST00000413041 594 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 FAR2P4-202ENST00000425399 584 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 VDAC1P6-201ENST00000430062 855 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 CYCSP6-201ENST00000434498 302 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 AL035090.1-201ENST00000454835 332 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 AC074050.1-201ENST00000563247 211 ntBASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
SNAPC4Q5SXM2 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AL359091.1-201ENST00000449048 1734 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 RPL23P2-201ENST00000320371 421 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 MIR141-201ENST00000384975 95 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AL139128.1-201ENST00000413921 941 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC099677.3-201ENST00000427081 395 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 RPS23P9-201ENST00000448848 438 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AL450023.1-201ENST00000450868 751 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AL049779.2-201ENST00000553847 315 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 OR11J2P-201ENST00000555298 907 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 AC126915.2-201ENST00000610957 190 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms