Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL645933.2-201ENST00000606743 1207 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MIR6793-201ENST00000612376 63 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC018659.2-201ENST00000624690 715 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL357562.1-201ENST00000624911 609 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AF287957.1-201ENST00000607368 1595 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 EPS15P1-202ENST00000459691 2071 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 OR13C1P-202ENST00000641378 2919 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC009831.5-201ENST00000624000 3189 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 OR52B3P-201ENST00000314715 928 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RNA5SP211-201ENST00000365516 117 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MIR1203-201ENST00000408812 85 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RPL35AP3-201ENST00000414680 288 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC093719.1-201ENST00000480427 441 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 SNORA81.2-201ENST00000516868 170 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC087752.1-201ENST00000391360 558 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 RN7SKP206-201ENST00000410823 293 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AL096829.1-201ENST00000413677 457 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 NMD3P2-201ENST00000421815 761 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 SLC25A51P1-201ENST00000468432 871 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC104109.1-201ENST00000498563 436 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AP001804.1-201ENST00000526868 919 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC119501.1-201ENST00000603646 475 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 RPL12P48-201ENST00000605620 304 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AP000894.4-201ENST00000610185 483 ntBASIC7.32□□□□□ -1.24
RFX7Q2KHR2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
RFX7Q2KHR2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
RFX7Q2KHR2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms