Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 MYL6P4-201ENST00000477911 453 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SRSF4Q08170 AL135933.1-201ENST00000498657 802 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AL117351.2-201ENST00000513571 157 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 RN7SKP183-201ENST00000517169 324 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 GLYATL1P4-201ENST00000529326 906 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.69□□□□□ -1.5
SRSF4Q08170 HNRNPCP1-201ENST00000556181 766 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 OR4N3P-201ENST00000559395 818 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC145350.1-201ENST00000567426 208 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 ACTG1P15-201ENST00000570019 1063 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AC245036.5-201ENST00000596330 847 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AL078623.1-201ENST00000602702 907 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 GAS5-AS1-201ENST00000602767 694 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AC009237.12-201ENST00000604755 742 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AL450336.1-201ENST00000605180 586 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC080013.3-201ENST00000606839 578 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 AC004477.3-201ENST00000614061 590 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC008121.2-201ENST00000614647 523 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC026367.3-201ENST00000619032 590 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC135068.4-201ENST00000622949 925 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC005753.1-201ENST00000623837 618 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 AC127071.1-201ENST00000624997 712 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.69□□□□□ -1.5
SRSF4Q08170 OR5AC4P-202ENST00000642086 985 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRSF4Q08170 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRSF4Q08170 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
SRSF4Q08170 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SRSF4Q08170 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.69□□□□□ -1.5
SRSF4Q08170 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRSF4Q08170 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SRSF4Q08170 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.69□□□□□ -1.5
SRSF4Q08170 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRSF4Q08170 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 AC011369.2-201ENST00000624423 1567 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRSF4Q08170 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 RNU4-39P-201ENST00000362455 127 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 RN7SKP237-201ENST00000364663 301 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 LCN1P2-201ENST00000372030 223 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRSF4Q08170 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SRSF4Q08170 RN7SKP146-201ENST00000410242 334 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 RNA5SP115-201ENST00000411160 107 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AC092865.3-201ENST00000425390 1026 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.68□□□□□ -1.5
SRSF4Q08170 ATP5C1P1-201ENST00000441945 895 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SRSF4Q08170 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 SNORD11.1-201ENST00000459482 85 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.68□□□□□ -1.5
SRSF4Q08170 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.68□□□□□ -1.5
SRSF4Q08170 RNA5SP518-201ENST00000515957 119 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 RNU6-334P-201ENST00000517072 102 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.68□□□□□ -1.5
SRSF4Q08170 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.68□□□□□ -1.5
SRSF4Q08170 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AP001803.1-201ENST00000525668 147 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 AC084851.2-201ENST00000530377 364 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.68□□□□□ -1.5
SRSF4Q08170 AL442163.2-201ENST00000553912 710 ntBASIC5.68□□□□□ -1.5
SRSF4Q08170 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.68□□□□□ -1.5
SRSF4Q08170 CKS1BP1-201ENST00000555221 240 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms