Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LTBQ06643 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LTBQ06643 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LTBQ06643 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 AP002833.3-201ENST00000625075 2265 ntBASIC5.81□□□□□ -1.48
LTBQ06643 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 U3.43-201ENST00000410734 213 ntBASIC5.81□□□□□ -1.48
LTBQ06643 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.81□□□□□ -1.48
LTBQ06643 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 AC007568.1-201ENST00000422912 471 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 SCAND3P1-201ENST00000439854 1060 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBQ06643 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.81□□□□□ -1.48
LTBQ06643 AC091874.2-201ENST00000505889 720 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC093870.1-201ENST00000506837 213 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC093664.1-201ENST00000511779 289 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBQ06643 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.81□□□□□ -1.48
LTBQ06643 MTND1P6-201ENST00000523621 946 ntBASIC5.81□□□□□ -1.48
LTBQ06643 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
LTBQ06643 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.81□□□□□ -1.48
LTBQ06643 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.81□□□□□ -1.48
LTBQ06643 RN7SL475P-201ENST00000583379 298 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC090616.1-201ENST00000583895 447 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AL139022.2-201ENST00000606934 443 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC017076.1-201ENST00000607613 578 ntBASIC5.81□□□□□ -1.48
LTBQ06643 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 MIR6085-201ENST00000618314 110 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC021766.1-201ENST00000624404 741 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AL139254.3-201ENST00000641097 674 ntBASIC5.81□□□□□ -1.48
LTBQ06643 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 AL353743.3-201ENST00000442109 1468 ntBASIC5.81□□□□□ -1.48
LTBQ06643 AC005702.3-201ENST00000585345 1447 ntBASIC5.81□□□□□ -1.48
LTBQ06643 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
LTBQ06643 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
LTBQ06643 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.81□□□□□ -1.48
LTBQ06643 AC011815.2-201ENST00000618230 2021 ntBASIC5.81□□□□□ -1.48
LTBQ06643 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 VIM2P-201ENST00000402383 1294 ntBASIC5.8□□□□□ -1.48
LTBQ06643 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 AC083862.1-201ENST00000427378 1242 ntBASIC5.8□□□□□ -1.48
LTBQ06643 DNAJA1P5-201ENST00000440278 943 ntBASIC5.8□□□□□ -1.48
LTBQ06643 XKRYP6-201ENST00000440468 1116 ntBASIC5.8□□□□□ -1.48
LTBQ06643 GTF2IP14-201ENST00000441415 586 ntBASIC5.8□□□□□ -1.48
LTBQ06643 XKRYP3-201ENST00000442113 1116 ntBASIC5.8□□□□□ -1.48
LTBQ06643 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 RN7SL101P-201ENST00000496350 279 ntBASIC5.8□□□□□ -1.48
LTBQ06643 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 RNA5SP441-201ENST00000516809 88 ntBASIC5.8□□□□□ -1.48
LTBQ06643 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 AC025857.1-201ENST00000525252 377 ntBASIC5.8□□□□□ -1.48
LTBQ06643 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 AC004805.3-201ENST00000603178 310 ntBASIC5.8□□□□□ -1.48
LTBQ06643 AC073046.2-201ENST00000604756 527 ntBASIC5.8□□□□□ -1.48
LTBQ06643 AC138473.1-201ENST00000605717 526 ntBASIC5.8□□□□□ -1.48
LTBQ06643 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.8□□□□□ -1.48
LTBQ06643 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms