Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL022237.1-201ENST00000446663 358 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 RPS27AP3-201ENST00000453803 454 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 VPS25P1-201ENST00000455691 508 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 GUSBP9-201ENST00000510138 584 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AC010343.2-201ENST00000510162 224 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AC093816.1-201ENST00000515076 913 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 RNU4-18P-201ENST00000516751 149 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 CYCSP25-201ENST00000525280 316 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AP001000.1-201ENST00000526843 742 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC027229.1-201ENST00000583887 253 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC087468.1-201ENST00000604365 630 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 AF117829.2-201ENST00000619538 361 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HDAC4P56524 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 AC006511.3-201ENST00000624929 1783 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 UGT2B24P-201ENST00000514441 1597 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 LINC01613-201ENST00000561476 2780 ntBASIC6.56□□□□□ -1.36
HDAC4P56524 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.56□□□□□ -1.36
HDAC4P56524 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AL133243.2-201ENST00000610331 1621 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.55□□□□□ -1.36
HDAC4P56524 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 RNU11-6P-201ENST00000391127 133 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.55□□□□□ -1.36
HDAC4P56524 NPM1P10-201ENST00000398310 865 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AL445238.1-204ENST00000400311 463 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC4P56524 MTND2P12-201ENST00000417560 1252 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC4P56524 RPL7AP51-201ENST00000422016 760 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 HMGB1P32-201ENST00000425971 565 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.55□□□□□ -1.36
HDAC4P56524 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.55□□□□□ -1.36
HDAC4P56524 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 SOCS5P1-201ENST00000440415 949 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC4P56524 AC103563.5-201ENST00000455643 364 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.55□□□□□ -1.36
HDAC4P56524 RN7SL221P-201ENST00000466190 281 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC135999.1-201ENST00000478962 479 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 HMGN1P16-201ENST00000508308 283 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.55□□□□□ -1.36
HDAC4P56524 OR4D12P-201ENST00000509361 911 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC026782.2-201ENST00000510845 636 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 SNORA74.1-201ENST00000516320 180 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC116917.1-201ENST00000520558 305 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.55□□□□□ -1.36
HDAC4P56524 OR4A6P-201ENST00000534364 970 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.55□□□□□ -1.36
HDAC4P56524 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
HDAC4P56524 WBP1LP11-201ENST00000586141 328 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 AC006924.1-201ENST00000610750 559 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HDAC4P56524 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HDAC4P56524 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.55□□□□□ -1.36
HDAC4P56524 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 AC068769.1-201ENST00000474767 2426 ntBASIC6.55□□□□□ -1.36
HDAC4P56524 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HDAC4P56524 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.54□□□□□ -1.36
HDAC4P56524 IMMTP1-201ENST00000435590 2219 ntBASIC6.54□□□□□ -1.36
HDAC4P56524 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.54□□□□□ -1.36
HDAC4P56524 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HDAC4P56524 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms