Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR6862-2-201ENST00000614755 70 ntBASIC6.71□□□□□ -1.34
CLCN3P51790 AC096861.1-201ENST00000616652 240 ntBASIC6.71□□□□□ -1.34
CLCN3P51790 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.71□□□□□ -1.34
CLCN3P51790 PABPC1P8-201ENST00000452851 2086 ntBASIC6.71□□□□□ -1.34
CLCN3P51790 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
CLCN3P51790 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.71□□□□□ -1.34
CLCN3P51790 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CLCN3P51790 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLCN3P51790 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.71□□□□□ -1.34
CLCN3P51790 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
CLCN3P51790 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLCN3P51790 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CLCN3P51790 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC112243.1-201ENST00000623949 3851 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.7□□□□□ -1.34
CLCN3P51790 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 RPS20P25-201ENST00000412447 352 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 RPL35AP3-201ENST00000414680 288 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 YY1P1-201ENST00000427625 668 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CLCN3P51790 AL022237.1-201ENST00000446663 358 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.7□□□□□ -1.34
CLCN3P51790 SETP20-201ENST00000457046 852 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.7□□□□□ -1.34
CLCN3P51790 RN7SL269P-201ENST00000467795 305 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 PSMA2P2-201ENST00000504319 686 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC022826.1-201ENST00000519383 805 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.7□□□□□ -1.34
CLCN3P51790 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC084033.1-201ENST00000550830 633 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.7□□□□□ -1.34
CLCN3P51790 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC092121.1-201ENST00000569452 202 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.7□□□□□ -1.34
CLCN3P51790 AC020916.2-201ENST00000591242 360 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 MIR6793-201ENST00000612376 63 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.7□□□□□ -1.34
CLCN3P51790 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CLCN3P51790 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.7□□□□□ -1.34
CLCN3P51790 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLCN3P51790 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
CLCN3P51790 AC119674.1-213ENST00000641177 1386 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CLCN3P51790 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.69□□□□□ -1.34
CLCN3P51790 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLCN3P51790 RNU105B-201ENST00000364478 208 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 MIR323B-201ENST00000385269 82 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CLCN3P51790 AC092642.1-201ENST00000392417 425 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 SNRPEP6-201ENST00000407465 277 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.69□□□□□ -1.34
CLCN3P51790 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.69□□□□□ -1.34
CLCN3P51790 BX284632.2-201ENST00000421091 399 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.69□□□□□ -1.34
CLCN3P51790 AL512605.1-202ENST00000441919 381 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 AL359955.2-201ENST00000445380 353 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.69□□□□□ -1.34
CLCN3P51790 AC112187.1-201ENST00000455837 479 ntBASIC6.69□□□□□ -1.34
CLCN3P51790 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.69□□□□□ -1.34
CLCN3P51790 UBFD1P1-201ENST00000473259 814 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms