Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
NEDD4P46934 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.08□□□□□ -1.28
NEDD4P46934 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 OR52B5P-204ENST00000641744 3467 ntBASIC7.08□□□□□ -1.28
NEDD4P46934 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NEDD4P46934 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.07□□□□□ -1.28
NEDD4P46934 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NEDD4P46934 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NEDD4P46934 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
NEDD4P46934 LYPLA1P3-201ENST00000402650 695 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 SNORA11.5-201ENST00000408163 128 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.07□□□□□ -1.28
NEDD4P46934 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.07□□□□□ -1.28
NEDD4P46934 CFL1P4-201ENST00000451536 498 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 GEMIN2P1-201ENST00000454246 752 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 AC124945.1-201ENST00000485133 188 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 CCDC11P1-201ENST00000503137 1162 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.07□□□□□ -1.28
NEDD4P46934 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.07□□□□□ -1.28
NEDD4P46934 RN7SKP248-201ENST00000516278 305 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 RNA5SP438-201ENST00000516561 112 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 AC110056.1-201ENST00000525759 911 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.07□□□□□ -1.28
NEDD4P46934 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.07□□□□□ -1.28
NEDD4P46934 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.07□□□□□ -1.28
NEDD4P46934 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.07□□□□□ -1.28
NEDD4P46934 AC012254.3-201ENST00000591183 2117 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 AL136097.3-201ENST00000611097 505 ntBASIC7.07□□□□□ -1.28
NEDD4P46934 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.07□□□□□ -1.28
NEDD4P46934 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.07□□□□□ -1.28
NEDD4P46934 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.07□□□□□ -1.28
NEDD4P46934 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NEDD4P46934 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NEDD4P46934 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NEDD4P46934 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 SELENOWP1-201ENST00000322792 252 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 OR56A4-201ENST00000330728 1209 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 RNA5SP211-201ENST00000365516 117 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.06□□□□□ -1.28
NEDD4P46934 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC7.06□□□□□ -1.28
NEDD4P46934 AL445928.1-201ENST00000435545 222 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 RPS12P17-201ENST00000438591 377 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 PCNPP2-201ENST00000441651 455 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 BMS1P10-201ENST00000443754 1120 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 AL445687.2-201ENST00000458156 728 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC008629.2-201ENST00000503783 483 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.06□□□□□ -1.28
NEDD4P46934 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.06□□□□□ -1.28
NEDD4P46934 AC006499.4-201ENST00000510947 694 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC114781.3-201ENST00000512083 142 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 SCARNA18.1-201ENST00000516330 83 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 TRIM77BP-201ENST00000524985 1119 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC005726.4-201ENST00000582858 458 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC090236.2-201ENST00000587933 1101 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 AC108865.2-201ENST00000606881 432 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 AC245014.3-201ENST00000618589 347 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NEDD4P46934 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 FO681491.1-202ENST00000623392 737 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NEDD4P46934 AC010168.2-201ENST00000562691 5428 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 RBPJP7-201ENST00000442803 1447 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 RBPJP5-201ENST00000449433 1447 ntBASIC7.06□□□□□ -1.28
NEDD4P46934 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NEDD4P46934 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
NEDD4P46934 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC7.06□□□□□ -1.28
NEDD4P46934 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms