Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC093829.1-201ENST00000506662 1618 ntBASIC6.93□□□□□ -1.3
CIITAP33076 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.93□□□□□ -1.3
CIITAP33076 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CIITAP33076 AC093225.1-201ENST00000506867 1408 ntBASIC6.93□□□□□ -1.3
CIITAP33076 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.92□□□□□ -1.3
CIITAP33076 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CIITAP33076 AL669831.5-218ENST00000591702 1873 ntBASIC6.92□□□□□ -1.3
CIITAP33076 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 TET1P1-201ENST00000426627 2301 ntBASIC6.92□□□□□ -1.3
CIITAP33076 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CIITAP33076 RNA5SP433-201ENST00000364491 114 ntBASIC6.92□□□□□ -1.3
CIITAP33076 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.92□□□□□ -1.3
CIITAP33076 AL132875.1-201ENST00000403623 949 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AC116036.1-201ENST00000412199 367 ntBASIC6.92□□□□□ -1.3
CIITAP33076 PTCD2P2-201ENST00000415579 1095 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AKR1B10P1-201ENST00000425765 942 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.92□□□□□ -1.3
CIITAP33076 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 UBE2V2P3-201ENST00000433562 437 ntBASIC6.92□□□□□ -1.3
CIITAP33076 MTCO3P17-201ENST00000443775 513 ntBASIC6.92□□□□□ -1.3
CIITAP33076 ZNF619P1-201ENST00000446539 752 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 AC068228.1-201ENST00000461723 211 ntBASIC6.92□□□□□ -1.3
CIITAP33076 PFN1P8-201ENST00000497012 543 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AC087272.1-201ENST00000523624 533 ntBASIC6.92□□□□□ -1.3
CIITAP33076 LINC00556-201ENST00000569603 412 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.92□□□□□ -1.3
CIITAP33076 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 AL645933.2-201ENST00000606743 1207 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AL136370.1-201ENST00000608166 691 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AC022960.2-201ENST00000616300 666 ntBASIC6.92□□□□□ -1.3
CIITAP33076 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AL357153.4-201ENST00000620487 1016 ntBASIC6.92□□□□□ -1.3
CIITAP33076 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.92□□□□□ -1.3
CIITAP33076 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.92□□□□□ -1.3
CIITAP33076 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 AC008627.1-201ENST00000517511 1704 ntBASIC6.92□□□□□ -1.3
CIITAP33076 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CIITAP33076 AC119674.1-202ENST00000641333 1860 ntBASIC6.92□□□□□ -1.3
CIITAP33076 AL033543.1-201ENST00000623440 13454 ntBASIC6.91□□□□□ -1.3
CIITAP33076 LYARP1-201ENST00000436977 1501 ntBASIC6.91□□□□□ -1.3
CIITAP33076 SHQ1P1-201ENST00000437111 1544 ntBASIC6.91□□□□□ -1.3
CIITAP33076 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.91□□□□□ -1.3
CIITAP33076 AC006600.2-201ENST00000624834 2506 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.91□□□□□ -1.3
CIITAP33076 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.91□□□□□ -1.3
CIITAP33076 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CIITAP33076 MIR621-201ENST00000384919 96 ntBASIC6.91□□□□□ -1.3
CIITAP33076 OOSP1-201ENST00000398992 1270 ntBASIC6.91□□□□□ -1.3
CIITAP33076 SNORA77.2-201ENST00000408571 112 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.91□□□□□ -1.3
CIITAP33076 AC110602.1-201ENST00000437414 318 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC079922.1-201ENST00000443291 359 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.91□□□□□ -1.3
CIITAP33076 AC112187.1-201ENST00000455837 479 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC023194.2-201ENST00000465398 406 ntBASIC6.91□□□□□ -1.3
CIITAP33076 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.91□□□□□ -1.3
CIITAP33076 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.91□□□□□ -1.3
CIITAP33076 CYP4F27P-201ENST00000514557 494 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.91□□□□□ -1.3
CIITAP33076 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.91□□□□□ -1.3
CIITAP33076 AP005119.1-201ENST00000580956 292 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC119403.2-201ENST00000590960 598 ntBASIC6.91□□□□□ -1.3
CIITAP33076 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.91□□□□□ -1.3
CIITAP33076 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.91□□□□□ -1.3
CIITAP33076 AL137246.2-201ENST00000613439 662 ntBASIC6.91□□□□□ -1.3
CIITAP33076 AC024884.1-201ENST00000620583 399 ntBASIC6.91□□□□□ -1.3
CIITAP33076 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
CIITAP33076 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.91□□□□□ -1.3
CIITAP33076 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 AC139426.3-201ENST00000605648 2059 ntBASIC6.91□□□□□ -1.3
CIITAP33076 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CIITAP33076 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CIITAP33076 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
CIITAP33076 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CIITAP33076 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CIITAP33076 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CIITAP33076 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms