Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.46□□□□□ -1.21
TM4SF1P30408 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
TM4SF1P30408 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.46□□□□□ -1.21
TM4SF1P30408 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
TM4SF1P30408 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TM4SF1P30408 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.46□□□□□ -1.21
TM4SF1P30408 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.46□□□□□ -1.21
TM4SF1P30408 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.46□□□□□ -1.21
TM4SF1P30408 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TM4SF1P30408 PABPC1P6-201ENST00000445594 1829 ntBASIC7.46□□□□□ -1.21
TM4SF1P30408 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TM4SF1P30408 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
TM4SF1P30408 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 RN7SKP59-201ENST00000410520 314 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 NMD3P2-201ENST00000421815 761 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 TNPO1P1-201ENST00000423641 1138 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 RN7SL826P-201ENST00000479724 288 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 BLNK-209ENST00000495266 440 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 HMGB1P42-201ENST00000532126 553 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AL049872.1-201ENST00000556323 322 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AL390726.5-202ENST00000564800 256 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 AC008115.3-201ENST00000614874 549 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 SAMMSON-227ENST00000642114 1199 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TM4SF1P30408 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TM4SF1P30408 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.46□□□□□ -1.22
TM4SF1P30408 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.46□□□□□ -1.22
TM4SF1P30408 CR383656.5-201ENST00000547616 1340 ntBASIC7.46□□□□□ -1.22
TM4SF1P30408 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TM4SF1P30408 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.46□□□□□ -1.22
TM4SF1P30408 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
TM4SF1P30408 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TM4SF1P30408 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 UGT2B27P-201ENST00000505092 1620 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 AP002370.1-201ENST00000528055 1602 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AP000534.2-201ENST00000412729 568 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 SMC4P1-201ENST00000414479 527 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 AL022331.1-201ENST00000429025 477 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 FMO7P-201ENST00000436045 768 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 AL606490.1-201ENST00000452266 765 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.45□□□□□ -1.22
TM4SF1P30408 RNA5SP400-201ENST00000517155 111 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.45□□□□□ -1.22
TM4SF1P30408 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC145423.1-201ENST00000605712 336 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 TNPO1P2-201ENST00000426249 2665 ntBASIC7.45□□□□□ -1.22
TM4SF1P30408 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.45□□□□□ -1.22
TM4SF1P30408 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
TM4SF1P30408 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
TM4SF1P30408 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
TM4SF1P30408 AL731556.1-201ENST00000394628 3711 ntBASIC7.44□□□□□ -1.22
TM4SF1P30408 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
TM4SF1P30408 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TM4SF1P30408 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TM4SF1P30408 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
TM4SF1P30408 LINC02019-201ENST00000608605 2060 ntBASIC7.44□□□□□ -1.22
TM4SF1P30408 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms