Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC027026.1-201ENST00000532323 742 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.73□□□□□ -1.33
COL11A1P12107 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.73□□□□□ -1.33
COL11A1P12107 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.73□□□□□ -1.33
COL11A1P12107 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.73□□□□□ -1.33
COL11A1P12107 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL11A1P12107 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.73□□□□□ -1.33
COL11A1P12107 GTF3AP1-201ENST00000416942 1004 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.73□□□□□ -1.33
COL11A1P12107 RPS7P3-201ENST00000443360 580 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 RPS27AP2-201ENST00000457576 465 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 ACA64.4-201ENST00000459070 127 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 AC023245.1-201ENST00000468501 517 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 AC022404.1-201ENST00000555320 273 ntBASIC6.73□□□□□ -1.33
COL11A1P12107 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.73□□□□□ -1.33
COL11A1P12107 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COL11A1P12107 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL11A1P12107 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COL11A1P12107 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.72□□□□□ -1.33
COL11A1P12107 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 SELENOWP1-201ENST00000322792 252 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 RAB28P2-201ENST00000454299 641 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 PFN1P6-201ENST00000476786 399 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.72□□□□□ -1.33
COL11A1P12107 AC109481.1-201ENST00000509173 282 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.72□□□□□ -1.33
COL11A1P12107 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.72□□□□□ -1.33
COL11A1P12107 MIR1273E-201ENST00000581165 102 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 OR7A1P-201ENST00000601206 970 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 AL353763.1-201ENST00000624467 1628 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.72□□□□□ -1.33
COL11A1P12107 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 PABPC1P8-201ENST00000452851 2086 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 AC005034.3-201ENST00000604845 1747 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.72□□□□□ -1.33
COL11A1P12107 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL11A1P12107 MRE11P1-201ENST00000464884 2127 ntBASIC6.72□□□□□ -1.33
COL11A1P12107 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
COL11A1P12107 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL11A1P12107 LINC02019-201ENST00000608605 2060 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.71□□□□□ -1.33
COL11A1P12107 AC012075.1-201ENST00000436549 580 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 AC006335.2-201ENST00000437993 330 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 AC079922.1-201ENST00000443291 359 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 CYCSP51-201ENST00000443545 318 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.71□□□□□ -1.33
COL11A1P12107 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.71□□□□□ -1.33
COL11A1P12107 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.71□□□□□ -1.33
COL11A1P12107 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.71□□□□□ -1.33
COL11A1P12107 MIR4700-201ENST00000578311 74 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 MIR4505-201ENST00000582238 73 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.71□□□□□ -1.33
COL11A1P12107 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.71□□□□□ -1.33
COL11A1P12107 AL136295.6-201ENST00000610486 658 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 AC136428.4-201ENST00000634254 1155 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 AC025470.1-201ENST00000510053 2032 ntBASIC6.71□□□□□ -1.33
COL11A1P12107 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL11A1P12107 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.71□□□□□ -1.34
COL11A1P12107 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL11A1P12107 SALL4P7-201ENST00000555779 3120 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.71□□□□□ -1.34
COL11A1P12107 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL11A1P12107 AC109780.1-201ENST00000451768 1344 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL11A1P12107 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL11A1P12107 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.71□□□□□ -1.34
COL11A1P12107 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
COL11A1P12107 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL11A1P12107 AC026348.1-201ENST00000462549 1053 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.71□□□□□ -1.34
COL11A1P12107 EIF3LP3-201ENST00000495197 822 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 RN7SL466P-201ENST00000497546 295 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 IGKV2-18-201ENST00000522607 343 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL11A1P12107 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.71□□□□□ -1.34
COL11A1P12107 AC090424.1-201ENST00000535243 736 ntBASIC6.71□□□□□ -1.34
COL11A1P12107 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COL11A1P12107 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms