Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NPM1P45-201ENST00000583151 559 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AL589743.6-201ENST00000611025 117 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCNAP12004 AC010998.3-201ENST00000613871 631 ntBASIC6.15□□□□□ -1.42
PCNAP12004 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.15□□□□□ -1.42
PCNAP12004 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.15□□□□□ -1.42
PCNAP12004 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
PCNAP12004 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.15□□□□□ -1.43
PCNAP12004 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PCNAP12004 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 LINC01616-201ENST00000561816 2280 ntBASIC6.15□□□□□ -1.43
PCNAP12004 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.15□□□□□ -1.43
PCNAP12004 AC125238.2-201ENST00000430003 1440 ntBASIC6.15□□□□□ -1.43
PCNAP12004 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
PCNAP12004 BIN2P1-201ENST00000504996 1530 ntBASIC6.15□□□□□ -1.43
PCNAP12004 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 RPL31P11-201ENST00000426558 1558 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 RN7SKP237-201ENST00000364663 301 ntBASIC6.14□□□□□ -1.43
PCNAP12004 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 AL607077.1-201ENST00000401718 499 ntBASIC6.14□□□□□ -1.43
PCNAP12004 UBTFL2-201ENST00000411859 1191 ntBASIC6.14□□□□□ -1.43
PCNAP12004 MRPS21P5-201ENST00000417885 231 ntBASIC6.14□□□□□ -1.43
PCNAP12004 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.14□□□□□ -1.43
PCNAP12004 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.14□□□□□ -1.43
PCNAP12004 AC083862.1-201ENST00000427378 1242 ntBASIC6.14□□□□□ -1.43
PCNAP12004 MED28P4-201ENST00000433137 572 ntBASIC6.14□□□□□ -1.43
PCNAP12004 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 PA2G4P1-201ENST00000442248 1197 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC092967.1-201ENST00000449016 481 ntBASIC6.14□□□□□ -1.43
PCNAP12004 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 RPS4XP17-201ENST00000479057 754 ntBASIC6.14□□□□□ -1.43
PCNAP12004 RPS7P11-201ENST00000484240 586 ntBASIC6.14□□□□□ -1.43
PCNAP12004 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 AC093815.1-201ENST00000508637 280 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 TPRX1P1-201ENST00000557620 319 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC037479.1-201ENST00000558361 625 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC009120.3-201ENST00000563335 499 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 AC107993.1-201ENST00000591343 684 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC073046.2-201ENST00000604756 527 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC022001.1-201ENST00000605193 268 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AL008723.3-201ENST00000608926 449 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.14□□□□□ -1.43
PCNAP12004 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 AC125336.1-201ENST00000508893 2827 ntBASIC6.14□□□□□ -1.43
PCNAP12004 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 AL353743.3-201ENST00000442109 1468 ntBASIC6.14□□□□□ -1.43
PCNAP12004 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PCNAP12004 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PCNAP12004 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.14□□□□□ -1.43
PCNAP12004 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.13□□□□□ -1.43
PCNAP12004 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCNAP12004 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PCNAP12004 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
PCNAP12004 SNORD94-201ENST00000386037 137 ntBASIC6.13□□□□□ -1.43
PCNAP12004 AL360271.1-201ENST00000395679 510 ntBASIC6.13□□□□□ -1.43
PCNAP12004 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.13□□□□□ -1.43
PCNAP12004 TMA16P2-201ENST00000413187 601 ntBASIC6.13□□□□□ -1.43
PCNAP12004 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms