Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL445649.1-201ENST00000615941 691 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AP001264.1-201ENST00000620602 703 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AC018692.2-201ENST00000624130 348 ntBASIC6.09□□□□□ -1.43
LDLRP01130 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
LDLRP01130 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
LDLRP01130 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
LDLRP01130 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.09□□□□□ -1.44
LDLRP01130 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.09□□□□□ -1.44
LDLRP01130 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.09□□□□□ -1.44
LDLRP01130 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
LDLRP01130 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.09□□□□□ -1.44
LDLRP01130 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LDLRP01130 ZNF806-201ENST00000438300 1774 ntBASIC6.08□□□□□ -1.44
LDLRP01130 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.08□□□□□ -1.44
LDLRP01130 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 RNA5SP474-201ENST00000391234 90 ntBASIC6.08□□□□□ -1.44
LDLRP01130 UBBP1-201ENST00000392399 473 ntBASIC6.08□□□□□ -1.44
LDLRP01130 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.08□□□□□ -1.44
LDLRP01130 RPL7P58-201ENST00000402913 758 ntBASIC6.08□□□□□ -1.44
LDLRP01130 MRPS21P5-201ENST00000417885 231 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.08□□□□□ -1.44
LDLRP01130 VN1R20P-201ENST00000425215 966 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AC021876.1-201ENST00000425959 359 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 AC012497.1-201ENST00000429392 575 ntBASIC6.08□□□□□ -1.44
LDLRP01130 RPS10P21-201ENST00000430654 475 ntBASIC6.08□□□□□ -1.44
LDLRP01130 MRPS21P3-201ENST00000436696 262 ntBASIC6.08□□□□□ -1.44
LDLRP01130 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AC079922.1-201ENST00000443291 359 ntBASIC6.08□□□□□ -1.44
LDLRP01130 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.08□□□□□ -1.44
LDLRP01130 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.08□□□□□ -1.44
LDLRP01130 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.08□□□□□ -1.44
LDLRP01130 AC104109.1-201ENST00000498563 436 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.08□□□□□ -1.44
LDLRP01130 SNORA48.9-201ENST00000516419 162 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.08□□□□□ -1.44
LDLRP01130 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.08□□□□□ -1.44
LDLRP01130 ANP32BP1-202ENST00000568553 737 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 AC010615.3-201ENST00000597319 394 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AL138895.2-201ENST00000603019 178 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AL590032.1-201ENST00000604920 252 ntBASIC6.08□□□□□ -1.44
LDLRP01130 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.08□□□□□ -1.44
LDLRP01130 MRPL57P1-201ENST00000621486 265 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AC061999.1-201ENST00000624454 177 ntBASIC6.08□□□□□ -1.44
LDLRP01130 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
LDLRP01130 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LDLRP01130 ZNF101P1-201ENST00000435701 1720 ntBASIC6.08□□□□□ -1.44
LDLRP01130 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.08□□□□□ -1.44
LDLRP01130 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.07□□□□□ -1.44
LDLRP01130 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 AL137058.3-201ENST00000624531 3099 ntBASIC6.07□□□□□ -1.44
LDLRP01130 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 AC011455.2-201ENST00000599320 3336 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
LDLRP01130 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
LDLRP01130 RNA5SP514-201ENST00000363717 111 ntBASIC6.07□□□□□ -1.44
LDLRP01130 RNA5SP485-201ENST00000365053 119 ntBASIC6.07□□□□□ -1.44
LDLRP01130 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LDLRP01130 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.07□□□□□ -1.44
LDLRP01130 SNORA77.2-201ENST00000408571 112 ntBASIC6.07□□□□□ -1.44
LDLRP01130 RN7SKP206-201ENST00000410823 293 ntBASIC6.07□□□□□ -1.44
LDLRP01130 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.07□□□□□ -1.44
LDLRP01130 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms