Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC093763.2-201ENST00000505334 1223 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFBP01127 SNORA70.20-201ENST00000516848 126 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFBP01127 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.29□□□□□ -1.4
PDGFBP01127 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 AC027279.1-201ENST00000568885 4284 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 AC004808.2-201ENST00000627965 773 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 AC116631.1-202ENST00000640984 683 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 OR4C1P-202ENST00000641065 1569 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 AC022819.1-201ENST00000563495 3910 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.29□□□□□ -1.4
PDGFBP01127 ICE2P1-201ENST00000512800 1849 ntBASIC6.29□□□□□ -1.4
PDGFBP01127 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDGFBP01127 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC6.29□□□□□ -1.4
PDGFBP01127 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PDGFBP01127 AL139384.2-201ENST00000613809 3590 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFBP01127 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFBP01127 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 PSMC1P2-201ENST00000423961 1204 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.28□□□□□ -1.4
PDGFBP01127 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC006499.3-201ENST00000506077 748 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFBP01127 OR4A46P-201ENST00000527255 933 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 AP001496.3-201ENST00000580230 913 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC015802.2-201ENST00000589690 189 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 AL161912.3-201ENST00000605404 628 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFBP01127 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFBP01127 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFBP01127 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.28□□□□□ -1.4
PDGFBP01127 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 AC079753.1-201ENST00000623243 3868 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 BX284613.1-201ENST00000452221 1641 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
PDGFBP01127 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.28□□□□□ -1.4
PDGFBP01127 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFBP01127 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.27□□□□□ -1.4
PDGFBP01127 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFBP01127 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFBP01127 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PDGFBP01127 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PDGFBP01127 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFBP01127 OR7E101P-201ENST00000400428 513 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFBP01127 CYCSP51-201ENST00000443545 318 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFBP01127 ZNF619P1-201ENST00000446539 752 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFBP01127 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFBP01127 AL122020.1-201ENST00000472287 459 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFBP01127 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFBP01127 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFBP01127 AC074141.1-201ENST00000588129 2995 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFBP01127 Mico1.1-201ENST00000611698 204 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 AC120057.5-201ENST00000623840 154 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFBP01127 Z93929.1-201ENST00000418200 1475 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFBP01127 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFBP01127 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms