Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.21□□□□□ -1.42
CCDC162PA2VCL2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCDC162PA2VCL2 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AL034417.1-201ENST00000399343 800 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 HMGA1P8-201ENST00000414130 321 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 FAM183DP-201ENST00000421987 399 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 RPL7AP51-201ENST00000422016 760 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 VN1R20P-201ENST00000425215 966 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 snoU13.29-201ENST00000459370 104 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 H3F3AP5-201ENST00000475267 429 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 SNX18P24-201ENST00000505249 671 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 Y_RNA.710-201ENST00000516975 110 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AP001000.1-201ENST00000526843 742 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 ARGFXP2-201ENST00000579304 949 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AL449283.1-201ENST00000602631 3403 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AC015799.1-201ENST00000622996 3122 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 CCNT2P1-201ENST00000423082 1315 ntBASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCDC162PA2VCL2 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 LINC02019-201ENST00000608605 2060 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 MIR191-201ENST00000384873 92 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 PSMA6P1-201ENST00000400275 741 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 RN7SKP146-201ENST00000410242 334 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC010086.1-201ENST00000437359 1052 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC097359.1-201ENST00000447946 463 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 KF459542.1-201ENST00000450908 553 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 HIGD1AP16-201ENST00000450986 258 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC112187.1-201ENST00000455837 479 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC116917.1-201ENST00000520558 305 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 RNU4ATAC-201ENST00000580972 127 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 RPSAP75-201ENST00000605848 301 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AL137067.2-201ENST00000621202 131 ntBASIC6.19□□□□□ -1.42
CCDC162PA2VCL2 AL162377.2-201ENST00000624532 337 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms