Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SL413P-201ENST00000482700 297 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC022826.1-201ENST00000519383 805 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC037479.1-201ENST00000558361 625 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC114477.1-201ENST00000605097 605 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AL139022.2-201ENST00000606934 443 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC018645.2-201ENST00000609151 472 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC090617.9-201ENST00000623751 147 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC083899.2-201ENST00000423285 1376 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 RANP6-201ENST00000413691 644 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 SETP9-201ENST00000423837 832 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 Z68868.1-201ENST00000429048 544 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 RPL6P30-201ENST00000443382 862 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 MOB1AP2-201ENST00000446060 614 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AL157827.1-201ENST00000447622 132 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 TVP23CP1-201ENST00000450317 639 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092691.2-201ENST00000461787 803 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 NPM1P29-201ENST00000483112 803 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 SNORA58-201ENST00000505219 137 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AL162632.2-201ENST00000553933 399 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC026956.1-201ENST00000558741 396 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC025283.1-201ENST00000572039 734 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AL356986.1-201ENST00000604085 341 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 BNIP3P31-201ENST00000604515 566 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC025171.4-201ENST00000607250 1047 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC087269.2-201ENST00000641764 975 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC005034.3-201ENST00000604845 1747 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 CASC19-228ENST00000641414 1684 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 AC007406.5-201ENST00000570140 3170 ntBASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.34□□□□□ -1.23
COL4A3BPQ9Y5P4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
COL4A3BPQ9Y5P4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 TNPO1P2-201ENST00000426249 2665 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 RNFT1P3-201ENST00000340898 1052 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 RNU1-46P-201ENST00000384425 164 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 TAF9BP2-201ENST00000400856 499 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL359092.1-201ENST00000417156 265 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL645939.3-201ENST00000435408 225 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 CLNS1AP1-201ENST00000435954 682 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00328-2P-201ENST00000436585 219 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC234771.2-201ENST00000445718 597 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 GXYLT1P1-201ENST00000446657 490 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 CCNJP1-201ENST00000450600 1149 ntBASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms