Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC135626.1-201ENST00000556983 435 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 MT1CP-201ENST00000567054 174 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 CLIC4P2-201ENST00000601934 717 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC011500.1-201ENST00000601963 469 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC016957.2-201ENST00000616998 848 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC097372.4-201ENST00000625025 466 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AC090181.3-201ENST00000624777 1514 ntBASIC6.59□□□□□ -1.35
DKK3Q9UBP4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
DKK3Q9UBP4 AL592429.1-201ENST00000403909 1473 ntBASIC6.59□□□□□ -1.36
DKK3Q9UBP4 TET1P1-201ENST00000426627 2301 ntBASIC6.59□□□□□ -1.36
DKK3Q9UBP4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
DKK3Q9UBP4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 ICE2P1-201ENST00000512800 1849 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 RNU1-46P-201ENST00000384425 164 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 MIR620-201ENST00000385232 95 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 RPL23AP85-201ENST00000421838 433 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC083862.1-201ENST00000427378 1242 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC079807.1-201ENST00000429993 481 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC007383.1-201ENST00000445875 636 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 RN7SL568P-201ENST00000493069 298 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC063943.2-201ENST00000495697 534 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC018645.1-201ENST00000505003 109 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC110760.3-202ENST00000515177 371 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC116917.1-201ENST00000520558 305 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 BUB1P1-201ENST00000603541 607 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AL157899.1-201ENST00000604110 936 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC011891.2-201ENST00000604949 397 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PPATP2-201ENST00000605635 508 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AL445647.2-201ENST00000615170 130 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC091046.2-201ENST00000620775 665 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC012653.2-201ENST00000621880 420 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 HSPA8P19-201ENST00000505359 1517 ntBASIC6.58□□□□□ -1.36
DKK3Q9UBP4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.58□□□□□ -1.36
DKK3Q9UBP4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
DKK3Q9UBP4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
DKK3Q9UBP4 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
DKK3Q9UBP4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DKK3Q9UBP4 AC011455.2-201ENST00000599320 3336 ntBASIC6.57□□□□□ -1.36
DKK3Q9UBP4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DKK3Q9UBP4 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms