Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC8.83□□□□□ -1
USP35Q9P2H5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC8.83□□□□□ -1
USP35Q9P2H5 RN7SL177P-201ENST00000476596 299 ntBASIC8.83□□□□□ -1
USP35Q9P2H5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.83□□□□□ -1
USP35Q9P2H5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC8.83□□□□□ -1
USP35Q9P2H5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC8.83□□□□□ -1
USP35Q9P2H5 ULK4P1-202ENST00000565174 503 ntBASIC8.83□□□□□ -1
USP35Q9P2H5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC8.83□□□□□ -1
USP35Q9P2H5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.83□□□□□ -1
USP35Q9P2H5 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.83□□□□□ -1
USP35Q9P2H5 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
USP35Q9P2H5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.83□□□□□ -1
USP35Q9P2H5 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.82□□□□□ -1
USP35Q9P2H5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 AC092111.2-201ENST00000611627 1414 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.82□□□□□ -1
USP35Q9P2H5 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 ST13P16-201ENST00000401760 781 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC002127.1-201ENST00000421305 225 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC083862.1-201ENST00000427378 1242 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 CLUHP1-201ENST00000435012 1190 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 CXCR2P1-202ENST00000443392 1074 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC8.82□□□□□ -1
USP35Q9P2H5 PCNAP1-201ENST00000505363 709 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC079905.1-201ENST00000549280 475 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC040174.2-201ENST00000602701 465 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 HMGB1P51-201ENST00000605166 638 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 RNU6-84P-201ENST00000607737 102 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 AL512624.1-201ENST00000613638 469 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 AC074276.2-201ENST00000619891 348 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 RACGAP1P-201ENST00000550663 1879 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.82□□□□□ -1
USP35Q9P2H5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC8.82□□□□□ -1
USP35Q9P2H5 AC132219.2-201ENST00000624416 2327 ntBASIC8.82□□□□□ -1
USP35Q9P2H5 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.82□□□□□ -1
USP35Q9P2H5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
USP35Q9P2H5 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 MTCO1P28-201ENST00000574177 1528 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 AKAP17BP-201ENST00000431706 2719 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.81□□□□□ -1
USP35Q9P2H5 SLC20A1P1-201ENST00000413906 956 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC8.81□□□□□ -1
USP35Q9P2H5 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.81□□□□□ -1
USP35Q9P2H5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.81□□□□□ -1
USP35Q9P2H5 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC8.81□□□□□ -1
USP35Q9P2H5 RN7SL284P-201ENST00000498823 275 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 OR4V1P-201ENST00000525394 1140 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 AL133399.1-201ENST00000527476 298 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC8.81□□□□□ -1
USP35Q9P2H5 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.81□□□□□ -1
USP35Q9P2H5 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC8.81□□□□□ -1
USP35Q9P2H5 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 AC051619.2-201ENST00000559063 397 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC8.81□□□□□ -1
USP35Q9P2H5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 AC100767.2-201ENST00000604840 693 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 Xist_exon4.1-201ENST00000615964 126 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 LINC00216-201ENST00000623548 1126 ntBASIC8.81□□□□□ -1
USP35Q9P2H5 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.81□□□□□ -1
USP35Q9P2H5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms