Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 DDX18P6-201ENST00000450119 1997 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL022311.1-201ENST00000623726 19416 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 RNU1-5P-201ENST00000362684 144 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SKP128-201ENST00000364270 303 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 MIR301B-201ENST00000390813 78 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 PTCD2P2-201ENST00000415579 1095 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 USP24P1-201ENST00000433802 779 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 EMC3-AS1-205ENST00000438698 534 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL356133.1-201ENST00000444762 372 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 SEPT7P3-201ENST00000455017 621 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SL372P-201ENST00000461982 298 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SL413P-201ENST00000482700 297 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC091544.1-201ENST00000484702 348 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AL079303.1-201ENST00000486611 463 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 CFI-204ENST00000510800 667 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 KHDC1P1-201ENST00000511053 508 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 PSMC1P8-201ENST00000536820 1296 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC023080.1-201ENST00000551663 931 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC010487.1-201ENST00000594408 1172 ntBASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.95□□□□□ -1.62
CTNNBIP1Q9NSA3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC010894.1-201ENST00000313760 361 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RNA5SP308-201ENST00000362532 115 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SKP77-201ENST00000363261 353 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RNU1-49P-201ENST00000363468 159 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RNA5SP302-201ENST00000364896 100 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RNA5SP279-201ENST00000365513 117 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SKP166-201ENST00000410812 305 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AL139135.1-201ENST00000412675 209 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RPL5P10-201ENST00000445207 894 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 CCDC11P1-201ENST00000503137 1162 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC105391.1-201ENST00000503155 1045 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC105420.1-201ENST00000504389 582 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 SNX18P24-201ENST00000505249 671 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 TOMM22P4-201ENST00000511318 336 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 MINOS1P4-201ENST00000515470 318 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RNA5SP418-201ENST00000515951 117 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC008055.1-201ENST00000547032 609 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC089984.3-201ENST00000552838 363 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AP001357.1-201ENST00000586304 1053 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AC141002.1-201ENST00000607025 279 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 RN7SL261P-201ENST00000613441 282 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 MIR6726-201ENST00000613751 61 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 AP003108.4-201ENST00000623917 878 ntBASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CTNNBIP1Q9NSA3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms