Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL131P-201ENST00000579043 256 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 AL603750.1-201ENST00000624216 1717 ntBASIC5.94□□□□□ -1.46
CCDC28BQ9BUN5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC026310.1-201ENST00000396004 378 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 RN7SKP166-201ENST00000410812 305 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC079809.1-201ENST00000415468 276 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC138761.5-201ENST00000433967 325 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 PPIAP10-201ENST00000438675 458 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 RPL12P24-201ENST00000474907 486 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 VDAC2P2-201ENST00000544463 901 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC010287.1-201ENST00000566916 357 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF322P1-201ENST00000568013 1209 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AP001542.1-201ENST00000591314 200 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC006115.2-201ENST00000596823 202 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AL591167.1-201ENST00000607321 456 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 RN7SL261P-201ENST00000613441 282 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AL138693.1-201ENST00000622219 129 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC006453.3-201ENST00000635891 377 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC099654.15-201ENST00000639802 509 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 AC006484.1-201ENST00000435086 1884 ntBASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC28BQ9BUN5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 HSPA8P14-201ENST00000552265 1805 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC003985.2-201ENST00000562268 1669 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 RNU1-49P-201ENST00000363468 159 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 RN7SKP121-201ENST00000410842 305 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 PTPN2P1-201ENST00000423212 1072 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC019185.3-201ENST00000438805 323 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL592114.2-201ENST00000440142 532 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 RPS7P4-201ENST00000444127 582 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 MED28P3-201ENST00000444288 531 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 EIF3LP3-201ENST00000495197 822 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC093816.1-201ENST00000515076 913 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC096661.1-201ENST00000515870 822 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms