Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC073335.1-201ENST00000427776 363 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SNAI1P1-201ENST00000428587 777 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 ASS1P11-201ENST00000441309 1216 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL591866.1-201ENST00000456162 401 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 Y_RNA.631-201ENST00000459607 101 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC022973.1-201ENST00000490340 575 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 PGAM1P9-201ENST00000503887 755 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC048346.1-201ENST00000510247 144 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 Y_RNA.672-201ENST00000516289 104 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 RNA5SP459-201ENST00000516628 100 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 RNA5SP135-201ENST00000517019 125 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 OR10Y1P-201ENST00000528485 974 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AL352979.1-201ENST00000554238 297 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 CYCSP2-201ENST00000558168 301 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC055876.1-202ENST00000567053 138 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC005668.1-201ENST00000571142 476 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 RN7SL381P-201ENST00000577658 298 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 MIR4307-201ENST00000582802 84 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC006557.4-201ENST00000585516 830 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 PCBP1-AS1-244ENST00000594376 1197 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 uc_338.30-201ENST00000612038 168 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 FAM238B-204ENST00000612040 423 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC008115.3-201ENST00000614874 549 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC138649.5-201ENST00000637456 137 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC124944.3-204ENST00000641191 150 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 VEZF1P1-201ENST00000423931 1541 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 CASC19-221ENST00000641309 1382 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 RND3-203ENST00000409557 2372 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 AC011330.1-201ENST00000510070 3235 ntBASIC7.82□□□□□ -1.16
USB1Q9BQ65 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 ABCB1-211ENST00000622132 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USB1Q9BQ65 LINC01344-203ENST00000608183 2631 ntTSL 2 BASIC7.82□□□□□ -1.16
USB1Q9BQ65 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 TP63-202ENST00000320472 2032 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 USP4-202ENST00000351842 3222 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 RNU6-1105P-201ENST00000384774 107 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 Y_RNA.579-201ENST00000390939 94 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 HIST1H2BPS2-201ENST00000402707 340 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 RNA5SP203-201ENST00000410451 136 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 HCG18-234ENST00000413358 916 ntTSL 3 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AL590806.1-201ENST00000415818 853 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 E2F4P1-201ENST00000422443 1133 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USB1Q9BQ65 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 MYL6BP1-201ENST00000429485 615 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 USP9YP16-201ENST00000430287 407 ntBASIC7.81□□□□□ -1.16
USB1Q9BQ65 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.81□□□□□ -1.16
USB1Q9BQ65 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms