Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CBX3P1-201ENST00000325243 554 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 MIR621-201ENST00000384919 96 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 RPL5P5-201ENST00000392009 893 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AL139098.1-201ENST00000407291 389 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 RNU4-27P-201ENST00000410889 139 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 NIFKP3-201ENST00000417799 865 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 UBTFL3-201ENST00000418934 1024 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 FNDC3CP-201ENST00000420795 1155 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 MTND2P23-201ENST00000422990 651 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC096632.2-201ENST00000438139 1239 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 KF459542.1-201ENST00000450908 553 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 SNRPCP11-201ENST00000492453 205 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC091951.2-201ENST00000500762 203 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC096751.1-202ENST00000502691 1067 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 HSPE1P10-201ENST00000508631 558 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 NACAP5-201ENST00000509863 636 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 HIGD1AP10-201ENST00000527837 282 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 NDFIP1P1-201ENST00000543144 525 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AKIRIN1P1-201ENST00000547384 544 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 ELOCP32-201ENST00000548625 324 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 UBE2FP2-201ENST00000566646 462 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC138207.8-204ENST00000579588 527 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC079880.2-201ENST00000603790 1213 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AP000255.1-201ENST00000610276 676 ntBASIC8.72□□□□□ -1.01
TRIM47Q96LD4 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM47Q96LD4 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM47Q96LD4 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 RN7SKP118-201ENST00000364331 330 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC007899.1-201ENST00000412776 775 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 FTOP1-201ENST00000419363 861 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 DNAJA1P6-201ENST00000437347 354 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 RPL29P7-201ENST00000440227 457 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC004924.1-201ENST00000480160 781 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC008040.4-201ENST00000494834 768 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 MTND2P33-201ENST00000506452 1031 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC095059.2-201ENST00000510601 933 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC022690.1-201ENST00000526681 550 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 C1GALT1P1-201ENST00000548895 1089 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM47Q96LD4 COX6CP16-201ENST00000603667 216 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AL390816.3-201ENST00000604527 1066 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AC113361.1-201ENST00000606683 543 ntBASIC8.71□□□□□ -1.02
TRIM47Q96LD4 AL159169.3-201ENST00000608871 561 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms