Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SUMO2P19-201ENST00000518920 295 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 COX6B1P4-201ENST00000519826 484 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AP005639.1-201ENST00000526939 192 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 DPPA3P2-202ENST00000557188 1219 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC063977.7-201ENST00000594454 337 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AL589863.1-201ENST00000595383 631 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AL589743.6-201ENST00000611025 117 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 MIR6823-201ENST00000622118 61 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC074141.1-201ENST00000588129 2995 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 MIR365B-201ENST00000362317 111 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 CYP4F30P-202ENST00000420048 405 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 Z82198.3-201ENST00000421145 199 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.04□□□□□ -1.28
HPS3Q969F9 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC7.04□□□□□ -1.28
HPS3Q969F9 VN1R38P-201ENST00000450265 887 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.04□□□□□ -1.28
HPS3Q969F9 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 RN7SL836P-201ENST00000476140 296 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 FTH1P8-201ENST00000498161 514 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC027338.1-201ENST00000514840 825 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.04□□□□□ -1.28
HPS3Q969F9 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC7.04□□□□□ -1.28
HPS3Q969F9 RPL3P13-201ENST00000550415 216 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC037479.1-201ENST00000558361 625 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.04□□□□□ -1.28
HPS3Q969F9 BNIP3P27-201ENST00000599991 412 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC012368.3-201ENST00000604190 219 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 BNIP3P35-201ENST00000604530 490 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC005899.7-201ENST00000618199 588 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
HPS3Q969F9 AC010168.2-201ENST00000562691 5428 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 AC010329.1-201ENST00000593903 8328 ntBASIC7.04□□□□□ -1.28
HPS3Q969F9 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
HPS3Q969F9 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.04□□□□□ -1.28
HPS3Q969F9 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HPS3Q969F9 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 AC011369.2-201ENST00000624423 1567 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 AL033543.1-201ENST00000623440 13454 ntBASIC7.03□□□□□ -1.28
HPS3Q969F9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.03□□□□□ -1.28
HPS3Q969F9 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HPS3Q969F9 RNA5SP77-201ENST00000365394 120 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms