Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 MTND3P20-201ENST00000407663 186 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 RN7SKP293-201ENST00000411389 296 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC117434.1-201ENST00000419971 836 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 BX284632.2-201ENST00000421091 399 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 FAM204CP-201ENST00000424489 642 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 SUMO2P3-201ENST00000438311 288 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AL512605.1-202ENST00000441919 381 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC009237.1-201ENST00000442127 744 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AL359955.2-201ENST00000445380 353 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC026348.1-201ENST00000462549 1053 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC008410.1-201ENST00000483777 339 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AP006245.2-201ENST00000522004 300 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC005244.1-201ENST00000582566 339 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC004223.2-201ENST00000590309 544 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 OR7E18P-201ENST00000592589 702 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AL645933.2-201ENST00000606743 1207 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 MIR6793-201ENST00000612376 63 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AL354950.1-201ENST00000614150 568 ntBASIC7.66□□□□□ -1.18
SYNE4Q8N205 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.66□□□□□ -1.18
SYNE4Q8N205 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
SYNE4Q8N205 AC092821.3-202ENST00000641304 2767 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 MIR433-201ENST00000384837 93 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC245060.4-201ENST00000413293 1121 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 UBE2V1P14-201ENST00000415815 558 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 CYP4F30P-202ENST00000420048 405 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 FO082842.1-201ENST00000423552 1370 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 BX119321.1-201ENST00000428912 797 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 VN1R38P-201ENST00000450265 887 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 SUMO2P10-201ENST00000452006 288 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 SNX18P26-201ENST00000458433 740 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 RN7SL515P-201ENST00000463999 297 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 CAB39P1-201ENST00000502277 460 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC106872.5-201ENST00000508856 1416 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 SCARNA18.1-201ENST00000516330 83 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 MIR5095-201ENST00000578844 88 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 RPL21P136-201ENST00000605378 396 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SYNE4Q8N205 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AL354696.1-201ENST00000614652 497 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 AC069234.4-201ENST00000621276 412 ntBASIC7.65□□□□□ -1.18
SYNE4Q8N205 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC7.65□□□□□ -1.18
SYNE4Q8N205 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
SYNE4Q8N205 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
SYNE4Q8N205 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SYNE4Q8N205 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
SYNE4Q8N205 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
SYNE4Q8N205 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 MTCO1P8-201ENST00000416914 1523 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms