Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL121835.1-201ENST00000404250 354 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 RPL35AP31-201ENST00000418340 337 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 BX284632.2-201ENST00000421091 399 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 NDUFS5P5-201ENST00000437256 321 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL512605.1-202ENST00000441919 381 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL359955.2-201ENST00000445380 353 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC005077.1-201ENST00000449226 375 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC016027.4-201ENST00000450866 277 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL445687.2-201ENST00000458156 728 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 UBFD1P1-201ENST00000473259 814 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC114781.3-201ENST00000512083 142 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 SNORD46.2-201ENST00000516021 102 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 RNA5SP271-201ENST00000516700 88 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC007494.1-201ENST00000562293 760 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AL355974.3-201ENST00000617383 467 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 MIR6886-201ENST00000619864 61 ntBASIC7.35□□□□□ -1.23
RFX7Q2KHR2 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC010168.2-201ENST00000562691 5428 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 TMSB4XP2-201ENST00000335179 210 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC023490.2-201ENST00000359859 470 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AL731534.1-201ENST00000434711 269 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 PCBP2P1-201ENST00000437262 977 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 SEPT14P12-201ENST00000442280 560 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AL162739.1-201ENST00000450606 307 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 GEMIN2P1-201ENST00000454246 752 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC011476.1-201ENST00000466725 307 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 RN7SL273P-201ENST00000481561 299 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 PSMA2P2-201ENST00000504319 686 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 RN7SKP248-201ENST00000516278 305 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AP003396.4-201ENST00000527574 265 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 MIR132-201ENST00000591554 101 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC092681.3-201ENST00000609463 678 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC096861.1-201ENST00000616652 240 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AC245014.3-201ENST00000618589 347 ntBASIC7.34□□□□□ -1.23
RFX7Q2KHR2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RFX7Q2KHR2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
RFX7Q2KHR2 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.34□□□□□ -1.24
RFX7Q2KHR2 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
RFX7Q2KHR2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RNA5SP500-201ENST00000364486 119 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.33□□□□□ -1.24
RFX7Q2KHR2 RPL12P12-201ENST00000424633 501 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AL390879.1-201ENST00000439143 386 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 ZNF619P1-201ENST00000446539 752 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 NXT1P1-201ENST00000458481 316 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 AC011411.1-201ENST00000509592 876 ntBASIC7.33□□□□□ -1.24
RFX7Q2KHR2 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms