Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
PDS5AQ29RF7 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.29□□□□□ -1.24
PDS5AQ29RF7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 SELENOWP1-201ENST00000322792 252 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 TMSB4XP2-201ENST00000335179 210 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 HMGA1P8-201ENST00000414130 321 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC079922.1-201ENST00000443291 359 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC112187.1-201ENST00000455837 479 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 RPL7P51-201ENST00000490532 749 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 USP9YP2-201ENST00000504503 1000 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 USP9YP1-201ENST00000513521 1002 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC087360.1-201ENST00000518788 616 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 WBP1LP3-201ENST00000523033 208 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 ZNF322P1-201ENST00000568013 1209 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC092121.1-201ENST00000569452 202 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC008521.2-201ENST00000591021 259 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC026124.2-201ENST00000621847 656 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AL512356.3-201ENST00000623005 461 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 SHQ1P1-201ENST00000437111 1544 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AL353763.1-201ENST00000624467 1628 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.28□□□□□ -1.24
PDS5AQ29RF7 AC091305.2-201ENST00000624049 1576 ntBASIC7.28□□□□□ -1.24
PDS5AQ29RF7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 RNA5SP375-201ENST00000362975 119 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 MIR323B-201ENST00000385269 82 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 SNORA17A-201ENST00000391185 133 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 RPS3AP2-201ENST00000407190 754 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AL445928.1-201ENST00000435545 222 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AP006222.1-205ENST00000450734 457 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AL022319.1-201ENST00000458183 1167 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AC104164.1-201ENST00000460282 590 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AC114781.3-201ENST00000512083 142 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AP001885.1-201ENST00000621658 558 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 SNORA17.5-201ENST00000630429 132 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 AC103703.1-201ENST00000634783 663 ntBASIC7.27□□□□□ -1.24
PDS5AQ29RF7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PDS5AQ29RF7 WBP11P1-201ENST00000562560 1931 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RN7SKP77-201ENST00000363261 353 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RN7SKP128-201ENST00000364270 303 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RNA5SP211-201ENST00000365516 117 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RPS7P3-201ENST00000443360 580 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RAB28P2-201ENST00000454299 641 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RPL7L1P3-201ENST00000455249 689 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 RN7SL273P-201ENST00000481561 299 ntBASIC7.27□□□□□ -1.25
PDS5AQ29RF7 PPIAP19-201ENST00000486414 492 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms